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PDB形式変換不可の PDB エントリー
8OIP
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BU of 8oip by Molmil
28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
分子名称: 12S rRNA, 28S ribosomal protein S15, mitochondrial, ...
著者Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
登録日2023-03-23
公開日2023-05-24
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIQ
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BU of 8oiq by Molmil
39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
分子名称: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
著者Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
登録日2023-03-23
公開日2023-06-14
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIR
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BU of 8oir by Molmil
55S human mitochondrial ribosome with mtRF1 and P-site tRNA
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
登録日2023-03-23
公開日2023-06-14
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIS
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BU of 8ois by Molmil
28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
分子名称: 12S rRNA, 28S ribosomal protein S10, mitochondrial, ...
著者Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
登録日2023-03-23
公開日2023-06-14
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIT
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BU of 8oit by Molmil
39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
分子名称: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ...
著者Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N.
登録日2023-03-23
公開日2023-06-14
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis of translation termination at noncanonical stop codons in human mitochondria.
Science, 380, 2023
8OIW
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BU of 8oiw by Molmil
Crystal structure of the cysteine-rich Gallus gallus urate oxidase in complex with the 8-azaxanthine inhibitor under oxidising conditions (space group P 21 21 21)
分子名称: 1,2-ETHANEDIOL, 8-AZAXANTHINE, CHLORIDE ION, ...
著者Di Palma, M, Chegkazi, M, Bui, S, Mori, G, Percudani, R, Steiner, R.A.
登録日2023-03-23
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Cysteine Enrichment Mediates Co-Option of Uricase in Reptilian Skin and Transition to Uricotelism.
Mol.Biol.Evol., 40, 2023
8OJ0
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BU of 8oj0 by Molmil
60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-23
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OJ5
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Peter, J.J, Kulathu, Y, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-23
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OJ8
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60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Penchev, I, DaRosa, P.A, Becker, T, Beckmann, R, Kopito, R.
登録日2023-03-24
公開日2024-02-21
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献UFM1 E3 ligase promotes recycling of 60S ribosomal subunits from the ER.
Nature, 627, 2024
8OKA
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BU of 8oka by Molmil
Human Mitochondrial Lon Y394F Mutant ADP Bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
著者Kereiche, S, Bauer, J.A, Matyas, P, Novacek, J, Kutejova, E.
登録日2023-03-28
公開日2024-04-10
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Polyphosphate and tyrosine phosphorylation in the N-terminal domain of the human mitochondrial Lon protease disrupts its functions.
Sci Rep, 14, 2024
8OL4
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BU of 8ol4 by Molmil
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2439 fibre in complex with GlcNAc
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell wall surface anchor family protein, ...
著者Caulton, S.G, Lovering, A.L.
登録日2023-03-30
公開日2023-10-25
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
8OLA
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BU of 8ola by Molmil
Carbonic Anhydrase IX like mutant in Complex with Steriod_Sulphamoyl inhibitor VK4
分子名称: Carbonic anhydrase 2, ZINC ION, [(3~{R},5~{R},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate
著者Brynda, J, Rezacova, P.M, Kudova, E.
登録日2023-03-30
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
8OM2
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BU of 8om2 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM3
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BU of 8om3 by Molmil
Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM4
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BU of 8om4 by Molmil
Small subunit of yeast mitochondrial ribosome.
分子名称: 15S mitochondrial rRNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Itoh, Y, Chicherin, I, Kamenski, P, Amunts, A.
登録日2023-03-31
公開日2024-01-10
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献METTL17 is an Fe-S cluster checkpoint for mitochondrial translation.
Mol.Cell, 84, 2024
8OM7
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BU of 8om7 by Molmil
Human Mitochondrial Lon Y186E Mutant ADP Bound
分子名称: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
著者Kereiche, S, Bauer, J.A, Matyas, P, Novacek, J, Kutejova, E.
登録日2023-03-31
公開日2024-04-10
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Polyphosphate and tyrosine phosphorylation in the N-terminal domain of the human mitochondrial Lon protease disrupts its functions.
Sci Rep, 14, 2024
8OM8
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BU of 8om8 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure A)
分子名称: 1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)V(IV)O4, ACETATE ION, CHLORIDE ION, ...
著者Paolillo, M, Ferraro, G, Merlino, A.
登録日2023-03-31
公開日2023-06-07
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8OMN
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BU of 8omn by Molmil
Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl VK4
分子名称: Carbonic anhydrase 2, ZINC ION, [(3~{R},5~{R},8~{R},9~{S},10~{S},13~{S},14~{S},17~{S})-17-ethanoyl-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-3-yl] sulfamate
著者Brynda, J, Rezacova, P.M, Kudova, E.
登録日2023-03-31
公開日2024-04-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Carbonic Anhydrase II in Complex with Steriod_Sulphamoyl
To Be Published
8OMS
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BU of 8oms by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure B)
分子名称: Lysozyme C, bis-[(1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)]-V(IV)O2
著者Paolillo, M, Ferraro, G, Merlino, A.
登録日2023-03-31
公開日2023-06-07
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8OMT
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BU of 8omt by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(empp)2] (Structure C)
分子名称: 1-methyl-2-ethyl-3-hydroxy-4(1H)-pyridinone)V(IV)O4, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C, ...
著者Paolillo, M, Merlino, A, Ferraro, G.
登録日2023-03-31
公開日2023-06-07
実験手法X-RAY DIFFRACTION (1.097 Å)
主引用文献Implications of Protein Interaction in the Speciation of Potential V IV O-Pyridinone Drugs.
Inorg.Chem., 62, 2023
8ONY
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BU of 8ony by Molmil
Human Methionine Aminopeptidase 2 at the 80S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L19, ...
著者Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
登録日2023-04-04
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8ONZ
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BU of 8onz by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L25-like protein, ...
著者Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
登録日2023-04-04
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8OO0
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BU of 8oo0 by Molmil
Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S0, ...
著者Klein, M.A, Wild, K, Kisonaite, M, Sinning, I.
登録日2023-04-04
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Nat Commun, 15, 2024
8OO3
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BU of 8oo3 by Molmil
X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 5 days soaking
分子名称: AMMONIA, Angiogenin, D(-)-TARTARIC ACID, ...
著者Ferraro, G, Merlino, A.
登録日2023-04-04
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity.
Dalton Trans, 52, 2023
8OO4
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X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 1 month soaking
分子名称: AMMONIA, Angiogenin, PLATINUM (II) ION
著者Ferraro, G, Merlino, A.
登録日2023-04-04
公開日2023-07-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity.
Dalton Trans, 52, 2023

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件を2024-07-10に公開中

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