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PDB形式変換不可の PDB エントリー
7QGN
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Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R.
登録日2021-12-09
公開日2022-04-27
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.
Nature, 603, 2022
7QGQ
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Extended H/L (SLPH/SLPL) complex from C. difficile (CD630 strain) fit into R20291 S-layer negative stain map
分子名称: Precursor of the S-layer proteins
著者Banerji, O, Wilson, J.S, Bullough, P.A.
登録日2021-12-09
公開日2022-04-06
実験手法ELECTRON CRYSTALLOGRAPHY
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
7QGR
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Structure of the SmrB-bound E. coli disome - collided 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R.
登録日2021-12-09
公開日2022-06-22
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.
Nature, 603, 2022
7QGU
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Structure of the B. subtilis disome - stalled 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R.
登録日2021-12-10
公開日2022-03-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (4.75 Å)
主引用文献Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.
Nature, 603, 2022
7QH4
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BU of 7qh4 by Molmil
Structure of the B. subtilis disome - collided 70S ribosome
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kratzat, H, Buschauer, R, Berninghausen, O, Beckmann, R.
登録日2021-12-10
公開日2022-03-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (5.45 Å)
主引用文献Ribosome collisions induce mRNA cleavage and ribosome rescue in bacteria.
Nature, 603, 2022
7QH9
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TarM(Se)_G117R-4RboP
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, TarM(Se)_G117R-4RboP, ...
著者Guo, Y, Stehle, T.
登録日2021-12-10
公開日2023-05-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.689 Å)
主引用文献Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Sci Adv, 9, 2023
7QHI
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Crystal structure of cytotoxin 13 from Naja naja, hexagonal form
分子名称: Cytotoxin 13
著者Samygina, V.R, Dubova, K.M, Bourenkov, G, Utkin, Y.N, Dubovskii, P.V.
登録日2021-12-12
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Variability in the Spatial Structure of the Central Loop in Cobra Cytotoxins Revealed by X-ray Analysis and Molecular Modeling.
Toxins, 14, 2022
7QHJ
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Peptide GAKSAA in complex with human cathepsin V C25A mutant
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ...
著者Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D.
登録日2021-12-13
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins.
Commun Biol, 6, 2023
7QHK
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Peptide QLRQQE in complex with human cathepsin V C25A mutant
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ...
著者Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D.
登録日2021-12-13
公開日2022-12-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Proteomic data and structure analysis combined reveal interplay of structural rigidity and flexibility on selectivity of cysteine cathepsins.
Commun Biol, 6, 2023
7QHS
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S. cerevisiae CMGE nucleating origin DNA melting
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
著者Lewis, J.S, Sousa, J.S, Costa, A.
登録日2021-12-14
公開日2022-06-15
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of replication origin melting nucleated by CMG helicase assembly.
Nature, 606, 2022
7QHV
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Crystal structure of the sulfoquinovosyl binding protein SmoF complexed with sulfoquinovosyl diacylglycerol
分子名称: GLYCINE, Sulfoquinovosyl binding protein, [(2~{S},3~{S},4~{S},5~{R},6~{S})-6-[(2~{S})-3-butanoyloxy-2-heptanoyloxy-propoxy]-3,4,5-tris(oxidanyl)oxan-2-yl]methanesulfonic acid
著者Snow, A, Davies, G.J.
登録日2021-12-14
公開日2022-04-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献The sulfoquinovosyl glycerol binding protein SmoF binds and accommodates plant sulfolipids.
Curr Res Struct Biol, 4, 2022
7QHW
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TTBK1 kinase domain in complex with inhibitor 29
分子名称: GLYCEROL, SULFATE ION, Tau-tubulin kinase 1, ...
著者Nozal, V, Liehta, D.
登録日2021-12-14
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献TDP-43 Modulation by Tau-Tubulin Kinase 1 Inhibitors: A New Avenue for Future Amyotrophic Lateral Sclerosis Therapy.
J.Med.Chem., 65, 2022
7QI4
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Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA)
分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
著者Singh, V, Itoh, Y, Amunts, A.
登録日2021-12-14
公開日2022-07-13
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Structure of mitoribosome reveals mechanism of mRNA binding, tRNA interactions with L1 stalk, roles of cofactors and rRNA modifications.
Biorxiv, 2023
7QI5
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Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
著者Singh, V, Itoh, Y, Amunts, A.
登録日2021-12-14
公開日2023-07-05
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.63 Å)
主引用文献Structure of mitoribosome reveals mechanism of mRNA binding, tRNA interactions with L1 stalk, roles of cofactors and rRNA modifications.
Biorxiv, 2023
7QI6
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Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution
分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ...
著者Singh, V, Itoh, Y, Amunts, A.
登録日2021-12-14
公開日2023-05-17
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structure of mitoribosome reveals mechanism of mRNA binding, tRNA interactions with L1 stalk, roles of cofactors and rRNA modifications.
Biorxiv, 2023
7QIJ
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Complex of the Yersinia enterocolitica Type III secretion export gate YscV with substrate:chaperone complex YscX:YscY
分子名称: Chaperone protein YscY, Low calcium response locus protein D, Yop proteins translocation protein X
著者Gilzer, D, Niemann, H.H.
登録日2021-12-15
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Direct interaction of a chaperone-bound type III secretion substrate with the export gate.
Nat Commun, 13, 2022
7QIW
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Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
分子名称: 25S rRNA, 5.8S rRNA, 50S ribosomal protein L22, ...
著者Cottilli, P, Itoh, Y, Amunts, A.
登録日2021-12-16
公開日2022-07-13
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献Cryo-EM structure and rRNA modification sites of a plant ribosome.
Plant Commun., 3, 2022
7QIZ
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Specific features and methylation sites of a plant 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S, 25S rRNA, ...
著者Cottilli, P, Itoh, Y, Amunts, A.
登録日2021-12-16
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Cryo-EM structure and rRNA modification sites of a plant ribosome.
Plant Commun., 3, 2022
7QJ5
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Structure of recombinant human gamma-Tubulin Ring Complex (spokes 1-14)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJ7
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Structure of recombinant human gamma-Tubulin Ring Complex 12-spoked assembly intermediate (spokes 1-12 substoichiometric spokes 13-14)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJ8
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Structure of recombinant human gamma-Tubulin Ring Complex 12-spoked assembly intermediate (spokes 3-14, substoichiometric spokes 1-2)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJA
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Structure of recombinant human gamma-Tubulin Ring Complex 12-spoked assembly intermediate (spokes 1-12, homogeneous dataset)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (9.2 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJB
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Structure of recombinant human gamma-Tubulin Ring Complex 12-spoked assembly intermediate (spokes 3-14, homogeneous dataset)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (9.2 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJC
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Structure of recombinant human gamma-Tubulin Ring Complex (spokes 1-14, homogeneous dataset)
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (16.1 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022
7QJD
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Structure of recombinant human gamma-Tubulin Ring Complex without actin
分子名称: Gamma-tubulin complex component 2, Gamma-tubulin complex component 3, Gamma-tubulin complex component 4, ...
著者Zupa, E, Pfeffer, S.
登録日2021-12-16
公開日2022-01-26
最終更新日2022-02-09
実験手法ELECTRON MICROSCOPY (7.1 Å)
主引用文献Modular assembly of the principal microtubule nucleator gamma-TuRC.
Nat Commun, 13, 2022

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