Formats available in PDBj REST services

Fetch API file formats

The following table lists the available file formats usable with download and display REST services for PDB files.

mmcif	PDB data (noatom+atom) in PDBx/mmcif format
mmjson-all	PDB data (noatom+atom) in mmjson format
mmjson-noatom	PDB data (noatom) in mmjson format
mmjson-plus	PDB data (plus) in mmjson format
pdbml-all	PDB data (noatom+atom) in PDBML format
pdbml-noatom	PDB data (noatom) in PDBML format
pdbml-extatom	PDB data (extatom) in XML format
rdf	PDB data (noatom) in RDF format
sf	PDB structure factor data in PDBx/mmCIF format
bu-cif	PDB Biological Unit structure in PDBx/mmCIF format
val-mmcif	Validation data in mmCIF format
val-xml	Validation data in XML format
val-pdf-full	Full validation report in PDF format
val-pdf	Validation report in PDF format
val-svg	Multipercentile validation results graph in SVG format
val-png	Multipercentile validation results graph in PNG format
2fo-fc-cif	2fo-fc map in mmCIF format
fo-fc-cif	fo-fc map in mmCIF format
2fo-fc-mtz	2fo-fc map in MTZ format
fo-fc-mtz	fo-fc map in MTZ format
2fo-fc-ccp4	2fo-fc map in CCP4 format
fo-fc-ccp4	fo-fc map in CCP4 format
pdb	PDB data in legacy flat file format
bu	PDB Biological Unit structure in legacy flat file format
pdb-bundle	Best-effort representation of legacy flatfile incompatible entries
nmr-uni-star	NMR data in NMR-STAR format
nmr-uni-nef	NMR data in NEF format
nmr_cs	NMR chemical shift data in NMR-STAR format
nmr_v2	NMR restraints data in NMR-STAR format
nmr	NMR restraints data in flat file format
fasta	Sequence information in fasta format

Search result (file) formats

The following table lists the available formats usable with the download and display REST services for the search APIs.

csv	comma-separated values
tsv	tab-separated values
json	json(JavaScript Object Notation) is a lightweight data-interchange format and based on a subset of the JavaScript.
jsonp	json format file with padding