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Yorodumi- PDB-1it5: Solution structure of apo-type PLA2 from Streptomyces violacerube... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1it5 | ||||||
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Title | Solution structure of apo-type PLA2 from Streptomyces violaceruber A-2688. | ||||||
Components | Phospholipase A2 | ||||||
Keywords | HYDROLASE / Prokaryotic PLA2 | ||||||
Function / homology | Function and homology information phospholipase A2 activity / arachidonate secretion / phospholipid metabolic process / metal ion binding Similarity search - Function | ||||||
Biological species | Streptomyces violaceoruber (bacteria) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Sugiyama, M. / Ohtani, K. / Izuhara, M. / Koike, T. | ||||||
Citation | Journal: J.Biol.Chem. / Year: 2002 Title: A novel prokaryotic phospholipase A2. Characterization, gene cloning, and solution structure. Authors: Sugiyama, M. / Ohtani, K. / Izuhara, M. / Koike, T. / Suzuki, K. / Imamura, S. / Misaki, H. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1it5.cif.gz | 48.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1it5.ent.gz | 35.3 KB | Display | PDB format |
PDBx/mmJSON format | 1it5.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1it5_validation.pdf.gz | 241 KB | Display | wwPDB validaton report |
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Full document | 1it5_full_validation.pdf.gz | 240.8 KB | Display | |
Data in XML | 1it5_validation.xml.gz | 3.4 KB | Display | |
Data in CIF | 1it5_validation.cif.gz | 4.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/it/1it5 ftp://data.pdbj.org/pub/pdb/validation_reports/it/1it5 | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 13570.782 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Streptomyces violaceoruber (bacteria) / Production host: Escherichia coli (E. coli) / References: UniProt: Q6UV28, phospholipase A2 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other / Details: NMR |
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-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M |
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Radiation wavelength | Relative weight: 1 |
-Processing
NMR ensemble | Conformers submitted total number: 1 |
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