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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDG36 |
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![]() | 4-hydroxy-tetrahydrodipicolinate synthase (N84D mutant)
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Function / homology | ![]() (R,S)-4-hydroxy-2-oxoglutarate aldolase activity / 4-hydroxy-tetrahydrodipicolinate synthase / 4-hydroxy-tetrahydrodipicolinate synthase activity / glyoxylate catabolic process / diaminopimelate biosynthetic process / lysine biosynthetic process via diaminopimelate / cytosol Similarity search - Function |
Biological species | ![]() |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Models
Model #3807 | ![]() Type: dummy / Software: (DAMFILT 5.0 (r9678)) / Radius of dummy atoms: 3.25 A / Chi-square value: 1.424 / P-value: 0.005573 ![]() |
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Model #3851 | ![]() Type: dummy / Radius of dummy atoms: 1.90 A / Symmetry: P1 / Chi-square value: 1.424 / P-value: 0.005573 ![]() |
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Sample
![]() | Name: 4-hydroxy-tetrahydrodipicolinate synthase (N84D mutant) Specimen concentration: 10 mg/ml |
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Buffer | Name: 20 mM Tris-HCl, 150 mM NaCl / pH: 8 |
Entity #1918 | Name: HTPA synthase N84D / Type: protein Description: 4-hydroxy-tetrahydrodipicolinate synthase (N84D mutant) Formula weight: 32.671 / Num. of mol.: 2 Source: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) References: UniProt: Q9PPB4 Sequence: MDKNIIIGAM TALITPFKNG KVDEQSYARL IKRQIENGID AVVPVGTTGE SATLTHEEHR TCIEIAVETC KGTKVKVLAG AGSDATHEAV GLAKFAKEHG ADGILSVAPY YNKPTQQGLY EHYKAIAQSV DIPVLLYNVP GRTGCEISTD TIIKLFRDCE NIYGVKEASG ...Sequence: MDKNIIIGAM TALITPFKNG KVDEQSYARL IKRQIENGID AVVPVGTTGE SATLTHEEHR TCIEIAVETC KGTKVKVLAG AGSDATHEAV GLAKFAKEHG ADGILSVAPY YNKPTQQGLY EHYKAIAQSV DIPVLLYNVP GRTGCEISTD TIIKLFRDCE NIYGVKEASG NIDKCVDLLA HEPRMMLISG EDAINYPILS NGGKGVISVT SNLLPDMISA LTHFALDENY KEAKKINDEL YNINKILFCE SNPIPIKTAM YLAGLIESLE FRLPLCSPSK ENFAKIEEVM KKYKIKGF |
-Experimental information
Beam | Instrument name: Diamond Light Source B21 / City: Didcot / 国: UK ![]() | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | |||||||||||||||||||||||||||||||||
Scan | Measurement date: Aug 2, 2017 / Exposure time: 3 sec. / Number of frames: 619 / Unit: 1/A /
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Distance distribution function P(R) |
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Result | Comments: The models displayed in this entry represent: Top, the averaged (DAMFILT) model obtained from the spatial alignment of several individual DAMMIF models (volume and bead occupancy corrected) ...Comments: The models displayed in this entry represent: Top, the averaged (DAMFILT) model obtained from the spatial alignment of several individual DAMMIF models (volume and bead occupancy corrected) and; Bottom, and individual DAMMIF model representative and corresponding fit. Additional individual DAMMIF models (in P1 symmetry) are provided in the full entry zip archive.
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