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- PDB-8tq7: Crystal structure of Fab.34.2.12 in complex with MHC-I (H2-Dd) -

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Basic information

Entry
Database: PDB / ID: 8tq7
TitleCrystal structure of Fab.34.2.12 in complex with MHC-I (H2-Dd)
Components
  • Beta-2-microglobulin
  • Fab 34.2.12 Light Chain
  • Fab.34.2.12 Heavy Chain
  • H-2 class I histocompatibility antigen, D-D alpha chain
  • Transmembrane protein gp41
KeywordsIMMUNE SYSTEM / histocompatibility complex class I / MHC-I / immune response / immune system Fab / antibody / anti-MHC antibody / cancer tumor
Function / homology
Function and homology information


Synthesis and processing of ENV and VPU / symbiont-mediated evasion of host immune response / positive regulation of establishment of T cell polarity / Alpha-defensins / Endosomal/Vacuolar pathway / DAP12 interactions / Antigen Presentation: Folding, assembly and peptide loading of class I MHC / ER-Phagosome pathway / DAP12 signaling / Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell ...Synthesis and processing of ENV and VPU / symbiont-mediated evasion of host immune response / positive regulation of establishment of T cell polarity / Alpha-defensins / Endosomal/Vacuolar pathway / DAP12 interactions / Antigen Presentation: Folding, assembly and peptide loading of class I MHC / ER-Phagosome pathway / DAP12 signaling / Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell / Dectin-2 family / antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent / Binding and entry of HIV virion / cellular defense response / positive regulation of plasma membrane raft polarization / positive regulation of receptor clustering / Neutrophil degranulation / host cell endosome membrane / actin filament organization / lumenal side of endoplasmic reticulum membrane / cellular response to iron(III) ion / antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent / negative regulation of forebrain neuron differentiation / Assembly Of The HIV Virion / peptide antigen assembly with MHC class I protein complex / regulation of erythrocyte differentiation / regulation of iron ion transport / MHC class I peptide loading complex / response to molecule of bacterial origin / HFE-transferrin receptor complex / T cell mediated cytotoxicity / Budding and maturation of HIV virion / antigen processing and presentation of endogenous peptide antigen via MHC class I / positive regulation of T cell cytokine production / MHC class I protein complex / negative regulation of neurogenesis / positive regulation of T cell mediated cytotoxicity / positive regulation of receptor-mediated endocytosis / multicellular organismal-level iron ion homeostasis / cellular response to nicotine / phagocytic vesicle membrane / positive regulation of cellular senescence / negative regulation of epithelial cell proliferation / sensory perception of smell / negative regulation of neuron projection development / iron ion transport / T cell differentiation in thymus / protein refolding / protein homotetramerization / clathrin-dependent endocytosis of virus by host cell / amyloid fibril formation / intracellular iron ion homeostasis / learning or memory / viral protein processing / symbiont entry into host cell / external side of plasma membrane / fusion of virus membrane with host plasma membrane / fusion of virus membrane with host endosome membrane / viral envelope / virion attachment to host cell / host cell plasma membrane / virion membrane / structural molecule activity / Golgi apparatus / protein homodimerization activity / extracellular space / membrane / plasma membrane / cytosol
Similarity search - Function
Envelope glycoprotein Gp160 / Retroviral envelope protein / Retroviral envelope protein GP41-like / Gp120 core superfamily / Envelope glycoprotein GP120 / Human immunodeficiency virus 1, envelope glycoprotein Gp120 / MHC class I, alpha chain, C-terminal / MHC_I C-terminus / MHC class I alpha chain, alpha1 alpha2 domains / Class I Histocompatibility antigen, domains alpha 1 and 2 ...Envelope glycoprotein Gp160 / Retroviral envelope protein / Retroviral envelope protein GP41-like / Gp120 core superfamily / Envelope glycoprotein GP120 / Human immunodeficiency virus 1, envelope glycoprotein Gp120 / MHC class I, alpha chain, C-terminal / MHC_I C-terminus / MHC class I alpha chain, alpha1 alpha2 domains / Class I Histocompatibility antigen, domains alpha 1 and 2 / Beta-2-Microglobulin / : / MHC class I-like antigen recognition-like / MHC class I-like antigen recognition-like superfamily / MHC classes I/II-like antigen recognition protein / : / Immunoglobulin/major histocompatibility complex, conserved site / Immunoglobulins and major histocompatibility complex proteins signature. / Immunoglobulin C-Type / Immunoglobulin C1-set / Immunoglobulin C1-set domain / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulin-like fold
Similarity search - Domain/homology
Beta-2-microglobulin / H-2 class I histocompatibility antigen, D-D alpha chain / Envelope glycoprotein gp160
Similarity search - Component
Biological speciesMus musculus (house mouse)
HIV-1 M:B_HXB2R (virus)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.8 Å
AuthorsJiang, J. / Boyd, L.F. / Natarajan, K. / Margulies, D.H.
Funding support United States, 1items
OrganizationGrant numberCountry
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) United States
CitationJournal: J Immunol. / Year: 2024
Title: Experimental Structures of Antibody/MHC-I Complexes Reveal Details of Epitopes Overlooked by Computational Prediction.
Authors: Boyd, L.F. / Jiang, J. / Ahmad, J. / Natarajan, K. / Margulies, D.H.
History
DepositionAug 6, 2023Deposition site: RCSB / Processing site: RCSB
Revision 1.0Mar 20, 2024Provider: repository / Type: Initial release
Revision 1.1Apr 10, 2024Group: Database references / Category: citation
Item: _citation.journal_volume / _citation.page_first / _citation.page_last
Revision 1.2Oct 30, 2024Group: Structure summary / Category: pdbx_entry_details / pdbx_modification_feature / Item: _pdbx_entry_details.has_protein_modification

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: H-2 class I histocompatibility antigen, D-D alpha chain
B: Beta-2-microglobulin
C: H-2 class I histocompatibility antigen, D-D alpha chain
D: Beta-2-microglobulin
E: Transmembrane protein gp41
F: Fab.34.2.12 Heavy Chain
G: Fab 34.2.12 Light Chain
H: Fab.34.2.12 Heavy Chain
L: Fab 34.2.12 Light Chain
P: Transmembrane protein gp41
hetero molecules


Theoretical massNumber of molelcules
Total (without water)182,19912
Polymers182,04510
Non-polymers1542
Water2,342130
1


  • Idetical with deposited unit
  • defined by author&software
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Unit cell
Length a, b, c (Å)87.587, 113.326, 196.369
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number19
Space group name H-MP212121
Space group name HallP2ac2ab
Symmetry operation#1: x,y,z
#2: x+1/2,-y+1/2,-z
#3: -x,y+1/2,-z+1/2
#4: -x+1/2,-y,z+1/2

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Components

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Protein , 2 types, 4 molecules ACBD

#1: Protein H-2 class I histocompatibility antigen, D-D alpha chain / MHC-I H2-Dd A chain


Mass: 31819.361 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Gene: H2-D1 / Plasmid: pET21b / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: P01900
#2: Protein Beta-2-microglobulin


Mass: 11660.350 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Gene: B2m / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: P01887

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Protein/peptide , 1 types, 2 molecules EP

#3: Protein/peptide Transmembrane protein gp41 / TM / Glycoprotein 41 / gp41


Mass: 1075.265 Da / Num. of mol.: 2 / Fragment: HV1: HIV-1 P18-I10 (UNP residues 311-320) / Source method: obtained synthetically / Source: (synth.) HIV-1 M:B_HXB2R (virus) / References: UniProt: P04578

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Antibody , 2 types, 4 molecules FHGL

#4: Antibody Fab.34.2.12 Heavy Chain


Mass: 22982.766 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Cell line (production host): 34.2.12 / Production host: Homo sapiens (human)
#5: Antibody Fab 34.2.12 Light Chain


Mass: 23484.734 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Mus musculus (house mouse) / Cell line (production host): 34.2.12 / Production host: Homo sapiens (human)

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Non-polymers , 3 types, 132 molecules

#6: Chemical ChemComp-EDO / 1,2-ETHANEDIOL / ETHYLENE GLYCOL


Mass: 62.068 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Formula: C2H6O2
#7: Chemical ChemComp-GOL / GLYCEROL / GLYCERIN / PROPANE-1,2,3-TRIOL


Mass: 92.094 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C3H8O3
#8: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 130 / Source method: isolated from a natural source / Formula: H2O

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Details

Has ligand of interestN
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.68 Å3/Da / Density % sol: 54.05 %
Crystal growTemperature: 291 K / Method: vapor diffusion, hanging drop / pH: 6.5 / Details: 12% PEG8000, 0.1 M MES, pH 6.5

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Data collection

DiffractionMean temperature: 273 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 22-ID / Wavelength: 1 Å
DetectorType: DECTRIS EIGER X 16M / Detector: PIXEL / Date: Sep 23, 2022
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 2.8→56.62 Å / Num. obs: 48825 / % possible obs: 96.9 % / Redundancy: 6.7 % / Biso Wilson estimate: 55.21 Å2 / CC1/2: 0.998 / CC star: 1 / Rmerge(I) obs: 0.099 / Rpim(I) all: 0.041 / Net I/σ(I): 12.9
Reflection shellResolution: 2.8→2.9 Å / Redundancy: 6.7 % / Rmerge(I) obs: 1.32 / Mean I/σ(I) obs: 1.2 / Num. unique obs: 4505 / CC1/2: 0.528 / CC star: 0.831 / Rpim(I) all: 0.547 / % possible all: 93.5

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Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
PHENIX1.20.1_4487refinement
XDSdata reduction
XDSdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB entry 5WEU

5weu


Resolution: 2.8→56.62 Å / SU ML: 0.3875 / Cross valid method: FREE R-VALUE / σ(F): 2 / Phase error: 27.0602
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2706 2374 5.01 %
Rwork0.2249 45031 -
obs0.2272 47405 96.95 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 72.22 Å2
Refinement stepCycle: LAST / Resolution: 2.8→56.62 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms12390 0 10 130 12530
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.003612736
X-RAY DIFFRACTIONf_angle_d0.679617356
X-RAY DIFFRACTIONf_chiral_restr0.04781876
X-RAY DIFFRACTIONf_plane_restr0.00472245
X-RAY DIFFRACTIONf_dihedral_angle_d17.90794498
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.8-2.860.37191360.34692494X-RAY DIFFRACTION92.74
2.86-2.920.32791390.30422558X-RAY DIFFRACTION94.43
2.92-2.990.34011270.28432539X-RAY DIFFRACTION94.84
2.99-3.060.35191370.27452571X-RAY DIFFRACTION95.12
3.06-3.150.30941340.27312569X-RAY DIFFRACTION95.89
3.15-3.240.32581410.26982630X-RAY DIFFRACTION96.82
3.24-3.340.37761380.28722624X-RAY DIFFRACTION97.29
3.34-3.460.27631320.24892602X-RAY DIFFRACTION96.71
3.46-3.60.2711400.22392656X-RAY DIFFRACTION97.86
3.6-3.760.22871400.21582690X-RAY DIFFRACTION97.99
3.76-3.960.27071390.21842636X-RAY DIFFRACTION97.75
3.96-4.210.24981420.20642700X-RAY DIFFRACTION98.41
4.21-4.540.2331440.17582691X-RAY DIFFRACTION98.54
4.54-4.990.23931430.1792703X-RAY DIFFRACTION98.65
4.99-5.710.26541440.19872736X-RAY DIFFRACTION98.6
5.71-7.20.24921460.242756X-RAY DIFFRACTION98.21
7.2-56.620.24771520.21042876X-RAY DIFFRACTION98.12
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
16.126652646481.32744193114-1.712265060744.53884839265-0.4849547883084.091933317450.2558737476090.3853555662880.400875579032-0.05814755079760.008353394858590.35168096789-0.310001926312-0.327658912973-0.257779227280.319890852738-0.1256005707830.02483989639630.663136457457-0.02857144377610.629379306133-66.04992147550.41817709450123.7993222832
27.29908529529-0.813006658224-4.892472531552.223304719370.5153392642525.704951857380.0599063164974-0.260988966049-0.02703088246710.0256556958441-0.04102863039710.00528209965861-0.130641532490.0202728343724-0.001486702477410.256957564212-0.014764197458-0.03913097074480.2468035934680.04454636495690.204260585166-36.995554842221.333118169322.0048653316
34.206536635990.07954965741720.3720623123589.157369811574.799846956446.04647588291-0.2773641474820.68288988347-0.676497181972-0.5474044576490.07637847915730.424801876195-0.087567608084-0.269358689608-0.05307384061360.207774272748-0.03321803362270.06034241029620.4878293668780.004532883771110.358098062656-40.93054539340.29511041144723.4284498667
48.82453484342-5.208466819944.20425720736.69434532328-0.8291830667552.75931690597-0.351412035331-1.054241849621.22425641650.1855083920990.221357451311-0.460651901916-0.5414435090880.2775764918820.03795817048130.269368564708-0.06924672788850.01464089980010.569292260346-0.06957863141430.456885264451-33.188729503414.402699474640.0666742279
55.867680112021.913863257773.218923344775.422350542424.356976242695.10419254562-0.02442782670440.3121496546640.1141472140810.192339548172-0.01094097670160.3636861652260.0311245786549-0.359198430852-0.1493673197090.330905070167-0.001230354742360.09297096975740.3816338556690.1864372553710.488019330419-41.25498706114.5537451217831.3311915633
69.427343473583.459785399753.042159122024.948795325973.711366404563.307406875680.117394154285-0.284208007045-0.9146352626830.4235647151470.0946403626940.2290759708721.04048368699-0.660499719041-0.1918024230730.354303853637-0.09075373255370.05258011663810.5123431729520.1500434472270.486906317478-42.0237878762-6.1606316499430.9518586774
74.828236433843.608692619073.217051376593.878910772471.840032927412.41398507868-0.0176658986357-0.0998723714491-0.482294992218-0.23563397965-0.0571371291693-0.3585217431620.5833126066990.57933138819-0.06911116176940.4216561221620.19050902-0.02416443637570.8507493938850.1187061131080.486437287193-31.226740521-4.9329434138640.320574147
82.53519736747-1.425045574882.025155496271.79990397404-0.9772764931062.36450689492-0.181500341449-0.244199533176-0.22997972110.1301427730090.05995623550680.06127694350920.256851166419-0.0108701870406-0.162266261250.952413307433-0.01651702832220.3490003908230.548156346250.201581022320.609339028566-42.5433015105-1.8764777863741.1617441446
94.23961415660.8825879380055.081011719343.835546458611.474545249266.14079417664-0.460171879782-0.7478201653990.393680780430.03194474383050.350983906676-0.08510381660110.00027603567278-0.3085757250730.1372496614730.3072777868580.006290726539390.06589106798591.00832229054-0.01427916009980.73020687132-53.35787333370.97568152443123.9281045499
105.818126449172.297552293324.838577439546.118370910164.720549824638.5905731647-0.267206836729-0.1511829087670.3298049235750.7883149629320.08947206838590.1979670926590.239473566213-0.307045493090.1061214372670.29415014820.05133440882530.04493043609590.3444565752860.14408298220.422491816668-36.46781146444.3285809304837.079257392
117.730134180094.57801689154.213502857312.788592664892.610717179742.659326556190.06386354505990.810657089374-0.8662529658860.7585689942790.461174571445-0.3601624417321.107491820090.356561514522-0.5536804418760.3954225453150.02228177233580.0416866833280.3689776758990.006157641936360.474958101341-36.789487998-7.4747175465827.428930918
126.053972722541.701854581062.31533505124.73023288663.937495292137.88406610243-0.03782499221380.4435528794170.764719209292-0.262594692660.235708056446-0.042898748248-0.7215968805560.484173440506-0.5725608388840.230925631040.06623508612440.1602603588680.4628349354980.08130516827220.609878408864-30.27340837464.9512276363229.7227727809
134.582880588680.607382767431-0.02041825835454.09838119715-0.216144194244.009113942360.060189702972-0.478860492119-0.6568776955960.1824735882690.205367274046-0.1183580069720.727477410181-0.0424551503276-0.1854862087520.423101768526-0.0306524054972-0.08111583356440.3868676076720.05278428236720.6425006716467.4521021276441.989025143265.4817944082
140.7357477354430.371056981391-0.3341500697641.04334995414-0.7023838101024.640649642770.268388154225-0.116409606335-0.004013676364320.895362521929-0.402981870134-0.3530915108461.10333993914-0.321304997422-0.06111146743791.32981679974-0.277370456498-0.02384677294640.477641883876-0.05324662228820.454587868093-5.7581101193526.991438928334.7356053758
152.61970907954-1.272450298720.9951510557576.458980672383.641385526236.76807900080.3368704738190.443353935595-0.04388366576310.0629769705305-0.508581017870.5183388173780.230739815523-0.3103360657680.3698930381510.472999042331-0.100632391967-0.06379527819590.704630598163-0.05984594428260.2971601996-9.814192329643.414421683147.4612182283
162.035411441850.01105612379640.110130690941.02503985829-0.3472125377870.915892567095-0.1737289863960.376819205567-0.09327700416350.145864834973-0.4344389971770.9058110806780.87431659729-1.096938641410.4673864993710.677518714068-0.4013101315260.05914089545381.11807747216-0.2075435142440.788417263166-18.084262010637.184577382651.0427155148
176.227540573813.755626581331.573730969737.512792696112.051708696323.1818172318-0.02601503773780.0820721622962-0.2400386416790.445527469053-0.422945727930.7355427317720.683712238305-1.427739486420.5178512324180.632665190608-0.2275065498130.05154280668191.18756982766-0.1557835117160.54812118031-14.805530641540.481435190152.6858091139
182.604118850652.32934090093-0.1087717324053.11052122995-2.687161721016.52980874527-0.9720537290040.3950974498340.191941234237-0.642262619949-0.4087714404170.759899454987-0.116261091908-1.579988388691.339010271160.663240366832-0.12863888891-0.01914254429141.43854299945-0.3487576568030.802898750104-19.815344011238.469288007141.7317918811
195.84244346802-5.2493800741.623320603547.77453270842-2.508113113313.75419083989-0.30753155905-0.773094461334-0.7787418890080.6581266774820.703491883506-0.3488414045980.129295903036-0.185582020883-0.3296526725070.283086782212-0.121492235166-0.07044676521330.7040191601170.05162413595590.6352693985711.362142725444.875744343771.4098405971
202.531943617591.48521873438-0.9547116824652.75879357675-1.173959353715.50826575038-0.0540258219062-0.02396834151240.2754027563940.223625018023-0.0257056663436-0.0335570658036-0.281366208091-0.6214395362640.03359023850880.2627866329490.0273232810904-0.003804492924750.313799187427-0.0862441440790.356598907801-2.7093096999343.55288605245.08150197854
211.796624160191.41290161065-0.2256184357783.888507230350.7049953756520.364577928754-0.176877920655-0.666800367170.6122911101940.6304447800630.279788073059-0.930639259061-1.04153668120.3429844874440.06461434652471.44628407860.0583692384746-0.2276989423580.531093061332-0.2426143820880.9293212275188.8353959728973.01625310224.46628311689
221.870917324-0.6433851942420.3561356275151.32554407083-1.118962785513.22469553030.08186740414870.1775708065850.8180168950150.244361886462-0.2106776223830.362942353664-1.05400779624-1.59083552602-0.5642781068120.5655503995870.4635259229660.2409561466691.26573231243-0.1846161163170.691075836035-19.886532995555.830700992114.1060149381
231.22387756284-1.462882953960.5884579928135.9575084385-0.1452999447471.46867168973-0.206966547729-0.01321562978390.209970471653-0.1282073312620.0967051482353-0.30107839813-1.05746557814-0.3192778264630.01405966014161.595918254060.27442453516-0.05138142286350.53289164002-0.1094034399540.825742295618-1.7679849688582.0428441115-3.62202002549
242.7546835049-0.62487343015-1.284238611842.133496818720.2006671762646.93473693815-0.05464913442180.0405647165752-0.0253934367427-0.0850924472915-0.00979941733850.05795287630710.130603396090.4040570778650.05085503168260.166258230696-0.02211063034770.0246378111350.154237470880.04403268232040.260202459097-17.551804975420.9473215387-6.86731499758
252.967306330581.746259507250.4569440402263.1136169735-0.4205262296921.827447727020.4012582708340.177281410281-0.8816240914810.50416124932-0.4247221337280.2370218283931.65952500054-0.7740451062470.08183937943461.2662851581-0.279138518170.1011031387630.773605817742-0.1445352508510.883757452771-20.7285027002-1.46193263527-25.5118685557
263.098353258460.01592272839891.064930258321.080597773930.9578030427881.20167644263-0.1253947483630.43361653191-1.220947025090.9407491211010.283195999399-0.6533047522540.817249616767-0.684466504219-0.1547283247361.54707887166-0.2596960657710.1510132974210.738315679453-0.1570729843540.765167450382-17.1746015198-3.7887859624-24.9265030406
276.290004762991.412291965540.4099662437411.889942707940.1304981345843.31526489282-0.2699615812050.766204402352-0.4432518887230.4639572524890.09178288492321.011343213961.37269634875-1.07573499490.1569121080631.14797550824-0.3221114651390.1135542833031.19428426079-0.025675804170.945015696051-26.5401718182.22887465545-27.8375521081
282.666804005-0.128717404091-0.5729791227033.36968527189-0.2922225113681.32935431920.113387947416-0.0568566062207-0.622591171036-0.414061303871-0.206298917423-0.3719572048781.133314428820.7296564813270.06181606741210.8780185378320.298214944616-0.006949617475430.5977169784270.1841781724110.531067723705-6.571600570674.005091606433.573597125
297.27703237934-2.146201803135.239783985435.90312347869-4.501017661855.487814603770.7184344119030.928687796019-0.984032157497-1.13054692734-0.0342525326637-0.109602322132.63287980010.18919112836-0.7224348232121.949411938670.18577353795-0.1658666393880.879948113498-0.2453408515510.797887525691-11.3841717052-8.03155407761-29.733946803
301.141610240241.010110866520.327724884994.596374972560.2864490861170.1550309830290.1190833761360.564402732223-0.4750157108140.672940960183-0.334289736982-0.53145985950.225052571914-0.305654888094-0.00673964994131.358551368650.2133943171430.09865724970331.05651530409-0.2903346023850.836227637303-6.18860598031-5.93875106776-29.5627869932
310.876151060205-0.720751132680.6497778547530.59920605918-0.6850011734273.72584192966-0.001491610078320.0933342198522-0.4490370147550.1147857078750.04670994995930.09166422258381.846153314390.235244518398-0.1166300362452.090404034660.199231948176-0.08851127535981.42679770556-0.4209089053611.1348798411-5.4807503712-14.5255960581-35.329334374
326.743443192731.64459811075-1.428076647811.94924213784-0.9930142933873.10916353156-0.2480336765480.9719526610150.295937112481-0.01634337577790.07994056787670.56321190042-0.0373878757902-0.1717873495260.09662472192170.268888586734-0.209930687203-0.06188493739070.687126024926-0.01091839925770.705356043085-72.4298897384-3.5024249534323.0685056725
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 2 through 174 )AA2 - 1741 - 173
22chain 'A' and (resid 175 through 274 )AA175 - 274174 - 273
33chain 'B' and (resid 1 through 11 )BB1 - 111 - 11
44chain 'B' and (resid 12 through 19 )BB12 - 1912 - 19
55chain 'B' and (resid 20 through 30 )BB20 - 3020 - 30
66chain 'B' and (resid 31 through 41 )BB31 - 4131 - 41
77chain 'B' and (resid 42 through 46 )BB42 - 4642 - 46
88chain 'B' and (resid 47 through 51 )BB47 - 5147 - 51
99chain 'B' and (resid 52 through 61 )BB52 - 6152 - 61
1010chain 'B' and (resid 62 through 77 )BB62 - 7762 - 77
1111chain 'B' and (resid 78 through 90 )BB78 - 9078 - 90
1212chain 'B' and (resid 91 through 99 )BB91 - 9991 - 99
1313chain 'C' and (resid 2 through 174 )CC2 - 1741 - 173
1414chain 'C' and (resid 175 through 274 )CC175 - 274174 - 273
1515chain 'D' and (resid 1 through 11 )DD1 - 111 - 11
1616chain 'D' and (resid 12 through 46 )DD12 - 4612 - 46
1717chain 'D' and (resid 47 through 90 )DD47 - 9047 - 90
1818chain 'D' and (resid 91 through 99 )DD91 - 9991 - 99
1919chain 'E' and (resid 1 through 10 )EE1 - 101 - 10
2020chain 'F' and (resid 1 through 123 )FF1 - 1231 - 123
2121chain 'F' and (resid 124 through 215 )FF124 - 215124 - 211
2222chain 'G' and (resid 2 through 113 )GG2 - 1131 - 112
2323chain 'G' and (resid 114 through 214 )GG114 - 214113 - 213
2424chain 'H' and (resid 1 through 123 )HH1 - 1231 - 123
2525chain 'H' and (resid 124 through 166 )HH124 - 166124 - 157
2626chain 'H' and (resid 167 through 197 )HH167 - 197158 - 188
2727chain 'H' and (resid 198 through 215 )HH198 - 215189 - 206
2828chain 'L' and (resid 2 through 113 )LI2 - 1131 - 112
2929chain 'L' and (resid 114 through 144 )LI114 - 144113 - 143
3030chain 'L' and (resid 145 through 187 )LI145 - 187144 - 186
3131chain 'L' and (resid 188 through 213 )LI188 - 213187 - 209
3232chain 'P' and (resid 1 through 10 )PJ1 - 101 - 10

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