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Yorodumi- PDB-8t31: Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR -
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| Entry | Database: PDB / ID: 8t31 | ||||||
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| Title | Crystal structure of GABARAP in complex with the LIR of TP53INP2/DOR | ||||||
|  Components | 
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|  Keywords | PROTEIN BINDING / Autophagy / GABARAP selectivity / DOR LIR / TP53INP2 LIR | ||||||
| Function / homology |  Function and homology information negative regulation of protein localization / positive regulation of protein K48-linked ubiquitination / regulation of Rac protein signal transduction / tissue homeostasis / GABA receptor binding / phosphatidylethanolamine binding / TBC/RABGAPs / cellular response to nitrogen starvation / microtubule associated complex / Macroautophagy ...negative regulation of protein localization / positive regulation of protein K48-linked ubiquitination / regulation of Rac protein signal transduction / tissue homeostasis / GABA receptor binding / phosphatidylethanolamine binding / TBC/RABGAPs / cellular response to nitrogen starvation / microtubule associated complex / Macroautophagy / regulation of neurotransmitter receptor localization to postsynaptic specialization membrane / smooth endoplasmic reticulum / autophagosome membrane / axoneme / extrinsic apoptotic signaling pathway via death domain receptors / autophagosome assembly / autophagosome maturation / beta-tubulin binding / protein targeting / mitophagy / sperm midpiece / autophagosome / ubiquitin binding / PML body / GABA-ergic synapse / microtubule cytoskeleton organization / osteoblast differentiation / intracellular protein localization / positive regulation of proteasomal ubiquitin-dependent protein catabolic process / protein transport / actin cytoskeleton / cytoplasmic vesicle / ubiquitin-dependent protein catabolic process / microtubule binding / chemical synaptic transmission / microtubule / lysosome / Golgi membrane / intracellular membrane-bounded organelle / ubiquitin protein ligase binding / positive regulation of DNA-templated transcription / nucleus / plasma membrane / cytosol Similarity search - Function | ||||||
| Biological species |  Homo sapiens (human) | ||||||
| Method |  X-RAY DIFFRACTION /  SYNCHROTRON /  MOLECULAR REPLACEMENT / Resolution: 2.096 Å | ||||||
|  Authors | Ali, M.G.H. / Wahba, H.M. / Cyr, N. / Omichinski, J.G. | ||||||
| Funding support |  Canada, 1items 
 | ||||||
|  Citation |  Journal: Autophagy / Year: 2024 Title: Structural and functional characterization of the role of acetylation on the interactions of the human Atg8-family proteins with the autophagy receptor TP53INP2/DOR. Authors: Ali, M.G. / Wahba, H.M. / Igelmann, S. / Cyr, N. / Ferbeyre, G. / Omichinski, J.G. | ||||||
| History | 
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Structure visualization
| Structure viewer | Molecule:  Molmil  Jmol/JSmol | 
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| PDBx/mmCIF format |  8t31.cif.gz | 278.7 KB | Display |  PDBx/mmCIF format | 
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| PDB format |  pdb8t31.ent.gz | 228.9 KB | Display |  PDB format | 
| PDBx/mmJSON format |  8t31.json.gz | Tree view |  PDBx/mmJSON format | |
| Others |  Other downloads | 
-Validation report
| Summary document |  8t31_validation.pdf.gz | 496.3 KB | Display |  wwPDB validaton report | 
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| Full document |  8t31_full_validation.pdf.gz | 502.3 KB | Display | |
| Data in XML |  8t31_validation.xml.gz | 24.4 KB | Display | |
| Data in CIF |  8t31_validation.cif.gz | 34 KB | Display | |
| Arichive directory |  https://data.pdbj.org/pub/pdb/validation_reports/t3/8t31  ftp://data.pdbj.org/pub/pdb/validation_reports/t3/8t31 | HTTPS FTP | 
-Related structure data
| Related structure data |  8t32C  8t33C  8t35C  8t36C  8t4tC C: citing same article ( | 
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| Similar structure data | Similarity search - Function & homology  F&H Search | 
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain: 
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