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Yorodumi- PDB-7rex: PreQ1-1 (type-1) riboswitch in complex with tandem stacked metabolites -
+Open data
-Basic information
Entry | Database: PDB / ID: 7rex | ||||||
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Title | PreQ1-1 (type-1) riboswitch in complex with tandem stacked metabolites | ||||||
Components | RNA (34-MER) | ||||||
Keywords | RNA / PREQ1 / PREQ0 / QUEUOSINE / RIBOSOMAL BINDING SITE / APTAMER / METABOLITE / SHINE-DALGARNO SEQUENCE / H-TYPE PSEUDOKNOT / RIBOSWITCH / RNA FOLDING / GENE REGULATION / RNA-LIGAND INTERACTIONS | ||||||
Function / homology | 7-DEAZA-7-AMINOMETHYL-GUANINE / RNA / RNA (> 10) Function and homology information | ||||||
Biological species | Carnobacterium antarcticum (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.6 Å | ||||||
Authors | Jenkins, J.L. / Schroeder, G.M. / Wedekind, J.E. | ||||||
Funding support | United States, 1items
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Citation | Journal: Nat Commun / Year: 2022 Title: A small RNA that cooperatively senses two stacked metabolites in one pocket for gene control Authors: Schroeder, G.M. / Cavender, C.E. / Blau, M.E. / Jenkins, J.L. / Mathews, D.H. / Wedekind, J.E. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7rex.cif.gz | 144.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7rex.ent.gz | 117.6 KB | Display | PDB format |
PDBx/mmJSON format | 7rex.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7rex_validation.pdf.gz | 2 MB | Display | wwPDB validaton report |
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Full document | 7rex_full_validation.pdf.gz | 2 MB | Display | |
Data in XML | 7rex_validation.xml.gz | 5.6 KB | Display | |
Data in CIF | 7rex_validation.cif.gz | 6.8 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/re/7rex ftp://data.pdbj.org/pub/pdb/validation_reports/re/7rex | HTTPS FTP |
-Related structure data
Related structure data | 3fu2S S: Starting model for refinement |
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Similar structure data |
-Links
-Assembly
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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