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Yorodumi- PDB-7lyz: PROTEIN MODEL BUILDING BY THE USE OF A CONSTRAINED-RESTRAINED LEA... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7lyz | ||||||
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Title | PROTEIN MODEL BUILDING BY THE USE OF A CONSTRAINED-RESTRAINED LEAST-SQUARES PROCEDURE | ||||||
Components | HEN EGG WHITE LYSOZYME | ||||||
Keywords | HYDROLASE(O-GLYCOSYL) | ||||||
Function / homology | Function and homology information Antimicrobial peptides / Neutrophil degranulation / beta-N-acetylglucosaminidase activity / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / killing of cells of another organism / defense response to Gram-negative bacterium / defense response to Gram-positive bacterium / defense response to bacterium ...Antimicrobial peptides / Neutrophil degranulation / beta-N-acetylglucosaminidase activity / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / killing of cells of another organism / defense response to Gram-negative bacterium / defense response to Gram-positive bacterium / defense response to bacterium / endoplasmic reticulum / extracellular space / identical protein binding / cytoplasm Similarity search - Function | ||||||
Biological species | Gallus gallus (chicken) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 2.5 Å | ||||||
Authors | Moult, J. / Yonath, A. / Sussman, J. / Herzberg, O. / Podjarny, A. / Traub, W. | ||||||
Citation | Journal: J.Appl.Crystallogr. / Year: 1983 Title: Protein Model Building by the Use of a Constrained-Restrained Least-Squares Procedure Authors: Herzberg, O. / Sussman, J.L. #1: Journal: J.Mol.Biol. / Year: 1976 Title: The Structure of Triclinic Lysozyme at 2.5 Angstroms Resolution Authors: Moult, J. / Yonath, A. / Traub, W. / Smilansky, A. / Podjarny, A. / Rabinovich, D. / Saya, A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7lyz.cif.gz | 29.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7lyz.ent.gz | 21 KB | Display | PDB format |
PDBx/mmJSON format | 7lyz.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ly/7lyz ftp://data.pdbj.org/pub/pdb/validation_reports/ly/7lyz | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
#1: Protein | Mass: 14331.160 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Gallus gallus (chicken) / References: UniProt: P00698, lysozyme |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 1.84 Å3/Da / Density % sol: 33.23 % |
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Crystal grow | *PLUS Method: unknown |
-Processing
Software | Name: CORELS / Classification: refinement | ||||||||||||
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Refinement | Highest resolution: 2.5 Å | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2.5 Å
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