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Yorodumi- PDB-6zfh: Structure of human galactokinase in complex with galactose and 2'... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 6zfh | ||||||
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| Title | Structure of human galactokinase in complex with galactose and 2'-(benzo[d]oxazol-2-ylamino)-7',8'-dihydro-1'H-spiro[cyclopentane-1,4'-quinazolin]-5'(6'H)-one | ||||||
 Components | Galactokinase | ||||||
 Keywords | TRANSFERASE / GHMP Kinase / Galactose metabolism / Inhibitor / Structural Genomics / Structural Genomics Consortium / SGC | ||||||
| Function / homology |  Function and homology informationglycolytic process from galactose / Defective GALK1 causes GALCT2 / galactitol metabolic process / galactokinase / galactokinase activity / Galactose catabolism / galactose catabolic process via UDP-galactose, Leloir pathway / galactose binding / galactose metabolic process / extracellular exosome ...glycolytic process from galactose / Defective GALK1 causes GALCT2 / galactitol metabolic process / galactokinase / galactokinase activity / Galactose catabolism / galactose catabolic process via UDP-galactose, Leloir pathway / galactose binding / galactose metabolic process / extracellular exosome / ATP binding / membrane / cytoplasm / cytosol Similarity search - Function  | ||||||
| Biological species |  Homo sapiens (human) | ||||||
| Method |  X-RAY DIFFRACTION /  SYNCHROTRON /  MOLECULAR REPLACEMENT / Resolution: 2.439 Å  | ||||||
 Authors | Bezerra, G.A. / Mackinnon, S. / Zhang, M. / Foster, W. / Bailey, H. / Arrowsmith, C. / Edwards, A. / Bountra, C. / Lai, K. / Yue, W.W. / Structural Genomics Consortium (SGC) | ||||||
| Funding support |   United Kingdom, 1items 
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 Citation |  Journal: Acs Chem.Biol. / Year: 2021Title: Fragment Screening Reveals Starting Points for Rational Design of Galactokinase 1 Inhibitors to Treat Classic Galactosemia. Authors: Mackinnon, S.R. / Krojer, T. / Foster, W.R. / Diaz-Saez, L. / Tang, M. / Huber, K.V.M. / von Delft, F. / Lai, K. / Brennan, P.E. / Arruda Bezerra, G. / Yue, W.W.  | ||||||
| History | 
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Structure visualization
| Structure viewer | Molecule:  Molmil Jmol/JSmol | 
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Downloads & links
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Download
| PDBx/mmCIF format |  6zfh.cif.gz | 1.1 MB | Display |  PDBx/mmCIF format | 
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| PDB format |  pdb6zfh.ent.gz | 944.3 KB | Display |  PDB format | 
| PDBx/mmJSON format |  6zfh.json.gz | Tree view |  PDBx/mmJSON format | |
| Others |  Other downloads | 
-Validation report
| Summary document |  6zfh_validation.pdf.gz | 1.8 MB | Display |  wwPDB validaton report | 
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| Full document |  6zfh_full_validation.pdf.gz | 1.8 MB | Display | |
| Data in XML |  6zfh_validation.xml.gz | 109.7 KB | Display | |
| Data in CIF |  6zfh_validation.cif.gz | 146.5 KB | Display | |
| Arichive directory |  https://data.pdbj.org/pub/pdb/validation_reports/zf/6zfh ftp://data.pdbj.org/pub/pdb/validation_reports/zf/6zfh | HTTPS FTP  | 
-Related structure data
| Related structure data | ![]() 6q3xC ![]() 6zgvC ![]() 6zgwC ![]() 6zgxC ![]() 6zgyC ![]() 6zgzC ![]() 6zh0C ![]() 1wuuS S: Starting model for refinement C: citing same article (  | 
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| Similar structure data | 
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain: 
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About Yorodumi



Homo sapiens (human)
X-RAY DIFFRACTION
United Kingdom, 1items 
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