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- PDB-6wc2: Crystal Structure of a Ternary MEF2 Chimera/NKX2-5/myocardin enha... -
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Basic information
Entry | Database: PDB / ID: 6wc2 | ||||||
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Title | Crystal Structure of a Ternary MEF2 Chimera/NKX2-5/myocardin enhancer DNA Complex | ||||||
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![]() | TRANSCRIPTION / Transcription Factor / DNA binding Protein / Cardiogenesis / Carcinogenesis | ||||||
Function / homology | ![]() Purkinje myocyte differentiation / right ventricular cardiac muscle tissue morphogenesis / septum secundum development / proepicardium development / pulmonary myocardium development / Nkx-2.5 complex / cardiac ventricle formation / apoptotic process involved in heart morphogenesis / atrioventricular node cell fate commitment / bundle of His development ...Purkinje myocyte differentiation / right ventricular cardiac muscle tissue morphogenesis / septum secundum development / proepicardium development / pulmonary myocardium development / Nkx-2.5 complex / cardiac ventricle formation / apoptotic process involved in heart morphogenesis / atrioventricular node cell fate commitment / bundle of His development / atrial cardiac muscle cell development / ERK5 cascade / ventricular cardiac myofibril assembly / mitochondrion distribution / atrioventricular node cell development / embryonic heart tube left/right pattern formation / positive regulation of cardioblast differentiation / atrial cardiac muscle tissue development / atrioventricular node development / ventricular cardiac muscle cell development / regulation of cardiac muscle cell proliferation / atrial septum morphogenesis / positive regulation of heart contraction / negative regulation of myotube differentiation / Physiological factors / cardiac conduction system development / cardiac conduction / YAP1- and WWTR1 (TAZ)-stimulated gene expression / pharyngeal system development / positive regulation of sodium ion transport / negative regulation of epithelial cell apoptotic process / mitochondrial genome maintenance / outflow tract septum morphogenesis / ventricular trabecula myocardium morphogenesis / heart trabecula formation / adult heart development / cardiac muscle tissue morphogenesis / embryonic heart tube development / aortic valve morphogenesis / Cardiogenesis / cardiac muscle cell development / epithelial cell apoptotic process / dendrite morphogenesis / cardiac muscle cell proliferation / negative regulation of cardiac muscle cell apoptotic process / DNA-binding transcription activator activity / muscle organ development / ventricular septum morphogenesis / Myogenesis / histone acetyltransferase binding / cardiac septum morphogenesis / SMAD binding / positive regulation of cardiac muscle hypertrophy / ERK/MAPK targets / heart looping / hemopoiesis / thyroid gland development / regulation of cardiac conduction / positive regulation of transcription initiation by RNA polymerase II / regulation of cardiac muscle contraction / vasculogenesis / heart morphogenesis / spleen development / cardiac muscle contraction / epithelial cell differentiation / positive regulation of neuron differentiation / cellular response to calcium ion / positive regulation of epithelial cell proliferation / epithelial cell proliferation / RNA polymerase II transcription regulatory region sequence-specific DNA binding / positive regulation of D-glucose import / negative regulation of canonical Wnt signaling pathway / protein-DNA complex / histone deacetylase binding / RNA polymerase II transcription regulator complex / sequence-specific double-stranded DNA binding / cell junction / MAPK cascade / heart development / DNA-binding transcription activator activity, RNA polymerase II-specific / DNA-binding transcription factor binding / transcription regulator complex / RNA polymerase II-specific DNA-binding transcription factor binding / sequence-specific DNA binding / transcription by RNA polymerase II / cell differentiation / DNA-binding transcription factor activity, RNA polymerase II-specific / transcription cis-regulatory region binding / protein dimerization activity / RNA polymerase II cis-regulatory region sequence-specific DNA binding / protein heterodimerization activity / DNA-binding transcription factor activity / negative regulation of DNA-templated transcription / DNA-templated transcription / apoptotic process / positive regulation of cell population proliferation / chromatin binding / positive regulation of gene expression / regulation of DNA-templated transcription / regulation of transcription by RNA polymerase II Similarity search - Function | ||||||
Biological species | ![]() synthetic construct (others) | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Lei, X. / Chen, L. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Crystal Structures of Ternary Complexes of MEF2 and NKX2-5 Bound to DNA Reveal a Disease Related Protein-Protein Interaction Interface. Authors: Lei, X. / Zhao, J. / Sagendorf, J.M. / Rajashekar, N. / Xu, J. / Dantas Machado, A.C. / Sen, C. / Rohs, R. / Feng, P. / Chen, L. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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PDBx/mmCIF format | ![]() | 454.7 KB | Display | ![]() |
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PDB format | ![]() | 367.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 6wc5C ![]() 6byyS S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Component-ID: _ / Refine code: _
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