[English] 日本語
Yorodumi- PDB-6war: Crystal structure of the MERS-CoV RBD bound by the neutralizing s... -
+
Open data
-
Basic information
| Entry | Database: PDB / ID: 6war | ||||||
|---|---|---|---|---|---|---|---|
| Title | Crystal structure of the MERS-CoV RBD bound by the neutralizing single-domain antibody MERS VHH-55 | ||||||
Components |
| ||||||
Keywords | VIRAL PROTEIN/IMMUNE SYSTEM / MERS-CoV / nanobody / coronavirus / RBD / VIRAL PROTEIN / VIRAL PROTEIN-IMMUNE SYSTEM complex | ||||||
| Function / homology | Function and homology informationmembrane fusion / host cell endoplasmic reticulum-Golgi intermediate compartment membrane / positive regulation of viral entry into host cell / receptor-mediated virion attachment to host cell / endocytosis involved in viral entry into host cell / fusion of virus membrane with host plasma membrane / fusion of virus membrane with host endosome membrane / viral envelope / host cell plasma membrane / virion membrane / membrane Similarity search - Function | ||||||
| Biological species | ![]() ![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.4 Å | ||||||
Authors | Wrapp, D. / Torres, G.M. / McLellan, J.S. | ||||||
| Funding support | United States, 1items
| ||||||
Citation | Journal: Cell / Year: 2020Title: Structural Basis for Potent Neutralization of Betacoronaviruses by Single-Domain Camelid Antibodies. Authors: Wrapp, D. / De Vlieger, D. / Corbett, K.S. / Torres, G.M. / Wang, N. / Van Breedam, W. / Roose, K. / van Schie, L. / Hoffmann, M. / Pohlmann, S. / Graham, B.S. / Callewaert, N. / Schepens, B. ...Authors: Wrapp, D. / De Vlieger, D. / Corbett, K.S. / Torres, G.M. / Wang, N. / Van Breedam, W. / Roose, K. / van Schie, L. / Hoffmann, M. / Pohlmann, S. / Graham, B.S. / Callewaert, N. / Schepens, B. / Saelens, X. / McLellan, J.S. | ||||||
| History |
|
-
Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
|---|
-
Downloads & links
-
Download
| PDBx/mmCIF format | 6war.cif.gz | 1020.2 KB | Display | PDBx/mmCIF format |
|---|---|---|---|---|
| PDB format | pdb6war.ent.gz | 859.7 KB | Display | PDB format |
| PDBx/mmJSON format | 6war.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 6war_validation.pdf.gz | 586.6 KB | Display | wwPDB validaton report |
|---|---|---|---|---|
| Full document | 6war_full_validation.pdf.gz | 628.6 KB | Display | |
| Data in XML | 6war_validation.xml.gz | 90.2 KB | Display | |
| Data in CIF | 6war_validation.cif.gz | 120.8 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/wa/6war ftp://data.pdbj.org/pub/pdb/validation_reports/wa/6war | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 6waqC ![]() 4l72S ![]() 5f1oS S: Starting model for refinement C: citing same article ( |
|---|---|
| Similar structure data |
-
Links
-
Assembly
| Deposited unit | ![]()
| |||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 2 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 3 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 4 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 5 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 6 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 7 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| 8 | ![]()
| |||||||||||||||||||||||||||||||||||||||
| Unit cell |
| |||||||||||||||||||||||||||||||||||||||
| Noncrystallographic symmetry (NCS) | NCS domain:
|
Movie
Controller
Components
About Yorodumi





X-RAY DIFFRACTION
United States, 1items
Citation












PDBj










