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Yorodumi- PDB-6thg: Cedar Virus attachment glycoprotein (G) in complex with human eph... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6thg | |||||||||||||||||||||
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Title | Cedar Virus attachment glycoprotein (G) in complex with human ephrin-B1 | |||||||||||||||||||||
Components |
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Keywords | VIRAL PROTEIN / attachment glycoprotein / beta-propeller / ephrin-B1 / complex | |||||||||||||||||||||
Function / homology | Function and homology information exo-alpha-sialidase activity / embryonic pattern specification / EPH-Ephrin signaling / Ephrin signaling / neural crest cell migration / plasma membrane => GO:0005886 / EPH-ephrin mediated repulsion of cells / ephrin receptor signaling pathway / positive regulation of T cell proliferation / EPHB-mediated forward signaling ...exo-alpha-sialidase activity / embryonic pattern specification / EPH-Ephrin signaling / Ephrin signaling / neural crest cell migration / plasma membrane => GO:0005886 / EPH-ephrin mediated repulsion of cells / ephrin receptor signaling pathway / positive regulation of T cell proliferation / EPHB-mediated forward signaling / T cell costimulation / ephrin receptor binding / axon guidance / cell-cell signaling / host cell surface receptor binding / cell adhesion / symbiont entry into host cell / membrane raft / viral envelope / synapse / virion attachment to host cell / host cell plasma membrane / virion membrane / extracellular exosome / nucleus / plasma membrane / cytoplasm Similarity search - Function | |||||||||||||||||||||
Biological species | Cedar virus Homo sapiens (human) | |||||||||||||||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 4.074 Å | |||||||||||||||||||||
Authors | Pryce, R. / Rissanen, I. / Harlos, K. / Bowden, T. | |||||||||||||||||||||
Funding support | United Kingdom, United States, 6items
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Citation | Journal: Life Sci Alliance / Year: 2020 Title: A key region of molecular specificity orchestrates unique ephrin-B1 utilization by Cedar virus. Authors: Pryce, R. / Azarm, K. / Rissanen, I. / Harlos, K. / Bowden, T.A. / Lee, B. | |||||||||||||||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6thg.cif.gz | 1.1 MB | Display | PDBx/mmCIF format |
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PDB format | pdb6thg.ent.gz | 981.5 KB | Display | PDB format |
PDBx/mmJSON format | 6thg.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/th/6thg ftp://data.pdbj.org/pub/pdb/validation_reports/th/6thg | HTTPS FTP |
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-Related structure data
Related structure data | 6thbSC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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