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Open data
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Basic information
Entry | Database: PDB / ID: 6ldp | ||||||
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Title | Structure of CDK5R1-bound FEM1C | ||||||
![]() | Protein fem-1 homolog C,Peptide from Cyclin-dependent kinase 5 activator 1 | ||||||
![]() | PROTEIN BINDING / ubiquitination E3 ligase | ||||||
Function / homology | ![]() superior olivary nucleus maturation / protein kinase 5 complex / G1 to G0 transition involved in cell differentiation / contractile muscle fiber / Activated NTRK2 signals through CDK5 / layer formation in cerebral cortex / neuron cell-cell adhesion / regulation of synaptic vesicle cycle / regulation of dendritic spine morphogenesis / ubiquitin-dependent protein catabolic process via the C-end degron rule pathway ...superior olivary nucleus maturation / protein kinase 5 complex / G1 to G0 transition involved in cell differentiation / contractile muscle fiber / Activated NTRK2 signals through CDK5 / layer formation in cerebral cortex / neuron cell-cell adhesion / regulation of synaptic vesicle cycle / regulation of dendritic spine morphogenesis / ubiquitin-dependent protein catabolic process via the C-end degron rule pathway / CRMPs in Sema3A signaling / NGF-stimulated transcription / cyclin-dependent protein serine/threonine kinase activator activity / axonal fasciculation / negative regulation of non-canonical NF-kappaB signal transduction / embryo development ending in birth or egg hatching / Cul2-RING ubiquitin ligase complex / regulation of neuron differentiation / regulation of cyclin-dependent protein serine/threonine kinase activity / Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models / beta-tubulin binding / protein kinase activator activity / ubiquitin-like ligase-substrate adaptor activity / alpha-tubulin binding / cyclin-dependent protein kinase holoenzyme complex / positive regulation of protein targeting to membrane / ephrin receptor signaling pathway / regulation of macroautophagy / ubiquitin ligase complex / positive regulation of microtubule polymerization / NPAS4 regulates expression of target genes / ionotropic glutamate receptor signaling pathway / ephrin receptor binding / protein serine/threonine kinase activator activity / cerebellum development / hippocampus development / regulation of actin cytoskeleton organization / peptidyl-threonine phosphorylation / axon guidance / ionotropic glutamate receptor binding / neuron migration / neuromuscular junction / neuron differentiation / G protein-coupled acetylcholine receptor signaling pathway / brain development / microtubule cytoskeleton organization / neuron projection development / actin filament binding / rhythmic process / positive regulation of neuron apoptotic process / presynapse / kinase activity / Neddylation / growth cone / ubiquitin-dependent protein catabolic process / perikaryon / peptidyl-serine phosphorylation / proteasome-mediated ubiquitin-dependent protein catabolic process / protease binding / Regulation of TP53 Activity through Phosphorylation / dendritic spine / postsynaptic density / protein kinase activity / protein ubiquitination / cadherin binding / neuron projection / axon / intracellular membrane-bounded organelle / negative regulation of DNA-templated transcription / neuronal cell body / calcium ion binding / dendrite / protein kinase binding / perinuclear region of cytoplasm / nucleoplasm / membrane / nucleus / plasma membrane / cytoplasm / cytosol Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Chen, X. / Liao, S. / Xu, C. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Molecular basis for arginine C-terminal degron recognition by Cul2 FEM1 E3 ligase. Authors: Chen, X. / Liao, S. / Makaros, Y. / Guo, Q. / Zhu, Z. / Krizelman, R. / Dahan, K. / Tu, X. / Yao, X. / Koren, I. / Xu, C. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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PDBx/mmCIF format | ![]() | 155.8 KB | Display | ![]() |
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PDB format | ![]() | 119.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 458.5 KB | Display | ![]() |
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Full document | ![]() | 466.7 KB | Display | |
Data in XML | ![]() | 27.1 KB | Display | |
Data in CIF | ![]() | 37.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 6lbfSC ![]() 6lbgC ![]() 6lbnC ![]() 6le6C ![]() 6lenC ![]() 6leyC ![]() 6lf0C ![]() 7cngC S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Assembly
Deposited unit | ![]()
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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