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Yorodumi- PDB-6kml: 2.09 Angstrom resolution crystal structure of tetrameric HigBA to... -
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-Basic information
Entry | Database: PDB / ID: 6kml | ||||||
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Title | 2.09 Angstrom resolution crystal structure of tetrameric HigBA toxin-antitoxin complex from E.coli | ||||||
Components |
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Keywords | TOXIN/ANTITOXIN / Toxin-antitoxin complex / HigBA / endoribonuclease / protein-protein complex / PROTEIN BINDING | ||||||
Function / homology | Function and homology information toxin-antitoxin complex / regulation of growth / core promoter sequence-specific DNA binding / regulation of mRNA stability / RNA endonuclease activity / Hydrolases; Acting on ester bonds / negative regulation of translation / regulation of DNA-templated transcription / protein homodimerization activity / RNA binding Similarity search - Function | ||||||
Biological species | Escherichia coli K-12 (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.095 Å | ||||||
Authors | Jadhav, P. / Sinha, V.K. / Rothweiler, U. / Singh, M. | ||||||
Funding support | India, 1items
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Citation | Journal: Biochem.J. / Year: 2020 Title: 2.09 angstrom Resolution structure of E. coli HigBA toxin-antitoxin complex reveals an ordered DNA-binding domain and intrinsic dynamics in antitoxin. Authors: Jadhav, P.V. / Sinha, V.K. / Chugh, S. / Kotyada, C. / Bachhav, D. / Singh, R. / Rothweiler, U. / Singh, M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6kml.cif.gz | 209.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6kml.ent.gz | 168 KB | Display | PDB format |
PDBx/mmJSON format | 6kml.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6kml_validation.pdf.gz | 447.3 KB | Display | wwPDB validaton report |
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Full document | 6kml_full_validation.pdf.gz | 450.2 KB | Display | |
Data in XML | 6kml_validation.xml.gz | 20.3 KB | Display | |
Data in CIF | 6kml_validation.cif.gz | 29 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/km/6kml ftp://data.pdbj.org/pub/pdb/validation_reports/km/6kml | HTTPS FTP |
-Related structure data
Related structure data | 6kmqC 5ifgS S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
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-Assembly
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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