Entry | Database: PDB / ID: 6iud |
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Title | Structure of Helicobacter pylori Soj-ADP complex bound to DNA |
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Components | - DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3')
- DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3')
- SpoOJ regulator (Soj)
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Keywords | DNA BINDING PROTEIN/DNA / Partition protein / DNA BINDING PROTEIN-DNA complex / DNA BINDING PROTEIN |
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Function / homology | Function and homology information
: / CobQ/CobB/MinD/ParA nucleotide binding domain / AAA domain / AAA domain / P-loop containing nucleotide triphosphate hydrolases / Rossmann fold / P-loop containing nucleoside triphosphate hydrolase / 3-Layer(aba) Sandwich / Alpha BetaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_bacteria.gif) Helicobacter pylori (bacteria) synthetic construct (others) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.506 Å |
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Authors | Yen, C.Y. / Chu, C.H. / Sun, Y.J. |
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Funding support | Taiwan, 1items Organization | Grant number | Country |
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Ministry of Science and Technology (Taiwan) | | Taiwan |
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Citation | Journal: Nucleic Acids Res. / Year: 2019 Title: Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation. Authors: Chu, C.H. / Yen, C.Y. / Chen, B.W. / Lin, M.G. / Wang, L.H. / Tang, K.Z. / Hsiao, C.D. / Sun, Y.J. |
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History | Deposition | Nov 28, 2018 | Deposition site: PDBJ / Processing site: PDBJ |
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Revision 1.0 | Feb 13, 2019 | Provider: repository / Type: Initial release |
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Revision 1.1 | Mar 13, 2019 | Group: Data collection / Database references / Category: citation Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.year |
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Revision 1.2 | Nov 22, 2023 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn / struct_ncs_dom_lim Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_label_asym_id / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id |
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