登録情報 データベース : PDB / ID : 6ht5 構造の表示 ダウンロードとリンクタイトル Oct4/Sox2:UTF1 structure 要素DNA (5'-D(*TP*TP*CP*AP*CP*TP*AP*GP*CP*AP*TP*AP*AP*CP*AP*AP*TP*GP*AP*GP*G)-3')DNA (5'-D(P*CP*CP*TP*CP*AP*TP*TP*GP*TP*TP*AP*TP*GP*CP*TP*AP*GP*TP*GP*AP*AP*G)-3')POU domain, class 5, transcription factor 1 Transcription factor SOX-2 詳細キーワード TRANSCRIPTION / Cell reprogramming / transcription factor / DNA binding機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
diencephalon morphogenesis / olfactory placode formation / lens induction in camera-type eye / ectodermal cell fate commitment / response to benzoic acid / retina morphogenesis in camera-type eye / regulation of myofibroblast cell apoptotic process / mesodermal cell fate commitment / HMG box domain binding / detection of mechanical stimulus involved in equilibrioception ... diencephalon morphogenesis / olfactory placode formation / lens induction in camera-type eye / ectodermal cell fate commitment / response to benzoic acid / retina morphogenesis in camera-type eye / regulation of myofibroblast cell apoptotic process / mesodermal cell fate commitment / HMG box domain binding / detection of mechanical stimulus involved in equilibrioception / pigment biosynthetic process / trophectodermal cell fate commitment / forebrain neuron differentiation / anatomical structure formation involved in morphogenesis / blastocyst growth / adenohypophysis development / positive regulation of epithelial cell differentiation / regulation of asymmetric cell division / response to oxygen-glucose deprivation / endodermal cell fate specification / Deactivation of the beta-catenin transactivating complex / endodermal cell fate commitment / germ-line stem cell population maintenance / positive regulation of cell-cell adhesion / POU domain binding / detection of mechanical stimulus involved in sensory perception of sound / negative regulation of calcium ion-dependent exocytosis / neuron fate commitment / trophectodermal cell differentiation / neuronal stem cell population maintenance / male genitalia development / female germ cell nucleus / cell fate specification / germ cell nucleus / tongue development / epithelial tube branching involved in lung morphogenesis / inner ear morphogenesis / RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding / stem cell population maintenance / positive regulation of neuroblast proliferation / lung alveolus development / positive regulation of Notch signaling pathway / negative regulation of Wnt signaling pathway / cytokine binding / somatic stem cell population maintenance / negative regulation of cell differentiation / inner ear development / blastocyst development / negative regulation of neuron differentiation / regulation of neurogenesis / neuroblast proliferation / positive regulation of transcription initiation by RNA polymerase II / negative regulation of osteoblast differentiation / cell fate commitment / embryonic organ development / cis-regulatory region sequence-specific DNA binding / response to retinoic acid / forebrain development / Notch signaling pathway / cellular response to cadmium ion / transcription repressor complex / positive regulation of neuron differentiation / : / male germ cell nucleus / cellular response to leukemia inhibitory factor / stem cell differentiation / positive regulation of cell differentiation / sensory perception of sound / lysine-acetylated histone binding / negative regulation of canonical Wnt signaling pathway / neuron differentiation / brain development / chromatin DNA binding / cerebral cortex development / Wnt signaling pathway / osteoblast differentiation / gene expression / DNA-binding transcription activator activity, RNA polymerase II-specific / DNA-binding transcription factor binding / RNA polymerase II-specific DNA-binding transcription factor binding / transcription regulator complex / sequence-specific DNA binding / transcription by RNA polymerase II / transcription cis-regulatory region binding / DNA-binding transcription factor activity, RNA polymerase II-specific / RNA polymerase II cis-regulatory region sequence-specific DNA binding / DNA-binding transcription factor activity / negative regulation of gene expression / negative regulation of DNA-templated transcription / ubiquitin protein ligase binding / chromatin binding / positive regulation of gene expression / regulation of DNA-templated transcription / chromatin / nucleolus / regulation of transcription by RNA polymerase II / positive regulation of DNA-templated transcription / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / DNA binding 類似検索 - 分子機能 Transcription factor SOX / SOX transcription factor / POU-specific domain / POU domain / Pou domain - N-terminal to homeobox domain / POU-specific (POUs) domain signature 1. / POU-specific (POUs) domain signature 2. / POU-specific (POUs) domain profile. / Found in Pit-Oct-Unc transcription factors / High mobility group box domain ... Transcription factor SOX / SOX transcription factor / POU-specific domain / POU domain / Pou domain - N-terminal to homeobox domain / POU-specific (POUs) domain signature 1. / POU-specific (POUs) domain signature 2. / POU-specific (POUs) domain profile. / Found in Pit-Oct-Unc transcription factors / High mobility group box domain / DNA Binding (I), subunit A / Homeobox, conserved site / 'Homeobox' domain signature. / Homeodomain / lambda repressor-like DNA-binding domains / 'Homeobox' domain profile. / Homeodomain / Homeobox domain / HMG (high mobility group) box / HMG boxes A and B DNA-binding domains profile. / 434 Repressor (Amino-terminal Domain) / high mobility group / High mobility group box domain / High mobility group box domain superfamily / Lambda repressor-like, DNA-binding domain superfamily / Homeobox-like domain superfamily / Orthogonal Bundle / Mainly Alpha 類似検索 - ドメイン・相同性 DNA / DNA (> 10) / POU domain, class 5, transcription factor 1 / Transcription factor SOX-2 類似検索 - 構成要素生物種 Mus musculus (ハツカネズミ)手法 X線回折 / シンクロトロン / 分子置換 / 解像度 : 3.451 Å 詳細データ登録者 Vahokoski, J. / Meusch, D. / Groves, M. / Pogenberg, V. / Wilmanns, M. 引用ジャーナル : To Be Published タイトル : Oct4/Sox2:UTF1 structure著者 : Vahokoski, J. / Pogenberg, V. / Wilmanns, M. 履歴 登録 2018年10月3日 登録サイト : PDBE / 処理サイト : PDBE改定 1.0 2019年10月23日 Provider : repository / タイプ : Initial release改定 1.1 2024年1月24日 Group : Data collection / Database references / Refinement descriptionカテゴリ : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
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