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Open data
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Basic information
Entry | Database: PDB / ID: 5v5v | ||||||||||||
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Title | Complex of NLGN2 with MDGA1 Ig1-Ig2 | ||||||||||||
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![]() | CELL ADHESION / synaptic organizers / regulatory complex / neuroligins / MDGAs | ||||||||||||
Function / homology | ![]() jump response / positive regulation of t-SNARE clustering / : / : / cerebral cortex radially oriented cell migration / spinal cord association neuron differentiation / gephyrin clustering involved in postsynaptic density assembly / terminal button organization / postsynaptic density protein 95 clustering / postsynaptic specialization assembly ...jump response / positive regulation of t-SNARE clustering / : / : / cerebral cortex radially oriented cell migration / spinal cord association neuron differentiation / gephyrin clustering involved in postsynaptic density assembly / terminal button organization / postsynaptic density protein 95 clustering / postsynaptic specialization assembly / postsynaptic membrane assembly / positive regulation of synaptic vesicle clustering / presynaptic membrane assembly / thigmotaxis / Neurexins and neuroligins / axon guidance receptor activity / ribbon synapse / Post-translational modification: synthesis of GPI-anchored proteins / inhibitory synapse / regulation of respiratory gaseous exchange by nervous system process / insulin metabolic process / neuron cell-cell adhesion / neurexin family protein binding / dopaminergic synapse / protein localization to synapse / inhibitory synapse assembly / regulation of AMPA receptor activity / positive regulation of inhibitory postsynaptic potential / glycinergic synapse / positive regulation of synapse assembly / regulation of synaptic membrane adhesion / positive regulation of protein localization to synapse / positive regulation of dendritic spine development / locomotory exploration behavior / plasma membrane => GO:0005886 / homophilic cell adhesion via plasma membrane adhesion molecules / positive regulation of excitatory postsynaptic potential / social behavior / neuromuscular process controlling balance / regulation of presynapse assembly / excitatory synapse / synaptic vesicle endocytosis / GABA-ergic synapse / side of membrane / sensory perception of pain / cell adhesion molecule binding / synapse assembly / positive regulation of synaptic transmission, glutamatergic / dendritic shaft / positive regulation of synaptic transmission, GABAergic / synapse organization / neuron migration / modulation of chemical synaptic transmission / positive regulation of insulin secretion / brain development / presynaptic membrane / nervous system development / signaling receptor activity / chemical synaptic transmission / postsynaptic membrane / axon / neuronal cell body / synapse / positive regulation of cell population proliferation / Golgi apparatus / cell surface / extracellular space / extracellular region / identical protein binding / plasma membrane / cytoplasm Similarity search - Function | ||||||||||||
Biological species | ![]() ![]() ![]() | ||||||||||||
Method | ![]() ![]() ![]() | ||||||||||||
![]() | Gangwar, S.P. / Machius, M. / Rudenko, G. | ||||||||||||
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![]() | ![]() Title: Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges. Authors: Gangwar, S.P. / Zhong, X. / Seshadrinathan, S. / Chen, H. / Machius, M. / Rudenko, G. | ||||||||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1.7 MB | Display | ![]() |
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PDB format | ![]() | 1.4 MB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 544.3 KB | Display | ![]() |
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Full document | ![]() | 604.4 KB | Display | |
Data in XML | ![]() | 141.1 KB | Display | |
Data in CIF | ![]() | 190.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 5v5wC ![]() 3bl8S C: citing same article ( S: Starting model for refinement |
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Similar structure data |
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Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Component-ID: _ / Refine code: _
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