PDB-5m45: Structure of Acetone Carboxylase purified from Xanthobacter autot...

ID or keywords:

Entry

Database: PDB / ID: 5m45

Title

Structure of Acetone Carboxylase purified from Xanthobacter autotrophicus

Components

(Acetone carboxylase ...

) x 3

Keywords

LIGASE /

carboxylation

Function / homology

Function and homology information

acetone carboxylase /

acetone carboxylase activity / cellular detoxification of acetone /

hydrolase activity /

Biological species

Xanthobacter autotrophicus Py2 (bacteria)

Method

X-RAY DIFFRACTION /

SYNCHROTRON /

MOLECULAR REPLACEMENT / Resolution: 1.87 Å

Authors

Kabasakal, B.V. / Wells, J.N. / Nwaobi, B.C. / Eilers, B.J. / Peters, J.W. / Murray, J.W.

Citation

Journal: Sci Rep / Year: 2017
Title: Structural Basis for the Mechanism of ATP-Dependent Acetone Carboxylation.
Authors: Mus, F. / Eilers, B.J. / Alleman, A.B. / Kabasakal, B.V. / Wells, J.N. / Murray, J.W. / Nocek, B.P. / DuBois, J.L. / Peters, J.W.

History

Deposition	Oct 18, 2016	Deposition site: PDBE / Processing site: PDBE
Revision 1.0	Aug 9, 2017	Provider: repository / Type: Initial release
Revision 1.1	Aug 16, 2017	Group: Database references / Category: citation / citation_author Item: _citation.page_first / _citation.page_last ..._citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title / _citation_author.name
Revision 1.2	Jan 17, 2024	Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_ncs_dom_lim Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_asym_id / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr1_symmetry / _pdbx_struct_conn_angle.ptnr2_auth_asym_id / _pdbx_struct_conn_angle.ptnr2_auth_comp_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr2_label_atom_id / _pdbx_struct_conn_angle.ptnr2_label_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.ptnr3_symmetry / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr1_symmetry / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn.ptnr2_symmetry / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id

Structure viewer	Molecule: MolmilJmol/JSmol

-
Download

PDBx/mmCIF format	5m45.cif.gz	2.5 MB	Display	PDBx/mmCIF format
PDB format	pdb5m45.ent.gz	2.1 MB	Display	PDB format
PDBx/mmJSON format	5m45.json.gz		Tree view	PDBx/mmJSON format
Others	Other downloads

-
Validation report

Arichive directory	https://data.pdbj.org/pub/pdb/validation_reports/m4/5m45 ftp://data.pdbj.org/pub/pdb/validation_reports/m4/5m45	HTTPS FTP

-
Related structure data

Related structure data	5svbC 5svcSC S: Starting model for refinement C: citing same article (ref.)
Similar structure data	5svc-d 6mus-d 6231 6o5b-d 6o7i-d 5avm-d 6yej-d 3ith-d Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Search similar-shape structures by Omokage search (details) Similarity search - Function & homologyF&H Search Similarity search - FunctionF&H Search Similarity search - HomologyF&H Search

-
Links

PDB pages	PDBj / wwPDB / NCBI
Related items in Molecule of the Month	#129 - Sep 2010 Isocitrate Dehydrogenase similarity (1) #154 - Oct 2012 Citric Acid Cycle similarity (1) #24 - Dec 2001 Glycogen Phosphorylase similarity (1) #55 - Jul 2004 DNA Ligase similarity (1) #16 - Apr 2001 Aminoacyl-tRNA Synthetases similarity (1)

Deposited unit

A: Acetone carboxylase alpha subunit

B: Acetone carboxylase beta subunit

C: Acetone carboxylase gamma subunit

D: Acetone carboxylase alpha subunit

E: Acetone carboxylase beta subunit

F: Acetone carboxylase gamma subunit

G: Acetone carboxylase alpha subunit

H: Acetone carboxylase beta subunit

I: Acetone carboxylase gamma subunit

J: Acetone carboxylase alpha subunit

K: Acetone carboxylase beta subunit

L: Acetone carboxylase gamma subunit

hetero molecules

744 kDa, 12 polymers
Search similar-shape structures of this assembly by Omokage search (details)

1

A: Acetone carboxylase alpha subunit

B: Acetone carboxylase beta subunit

C: Acetone carboxylase gamma subunit

D: Acetone carboxylase alpha subunit

E: Acetone carboxylase beta subunit

F: Acetone carboxylase gamma subunit

hetero molecules

defined by author&software
372 kDa, 6 polymers
Search similar-shape structures of this assembly by Omokage search (details)

2

G: Acetone carboxylase alpha subunit

H: Acetone carboxylase beta subunit

I: Acetone carboxylase gamma subunit

J: Acetone carboxylase alpha subunit

K: Acetone carboxylase beta subunit

L: Acetone carboxylase gamma subunit

hetero molecules

defined by author&software
372 kDa, 6 polymers
Search similar-shape structures of this assembly by Omokage search (details)

Unit cell

Length a, b, c (Å)	86.915, 139.733, 165.827
Angle α, β, γ (deg.)	65.89, 86.54, 88.69
Int Tables number	1
Space group name H-M	P1

Noncrystallographic symmetry (NCS)

NCS domain:
NCS domain segments:

Component-ID: 0 / Refine code: 0

Dom-ID	Ens-ID	Beg auth comp-ID	Beg label comp-ID	End auth comp-ID	End label comp-ID	Auth asym-ID	Label asym-ID	Auth seq-ID	Label seq-ID
1	1	ARG	ARG	GLU	GLU	A	A	15 - 776	15 - 776
2	1	ARG	ARG	GLU	GLU	D	D	15 - 776	15 - 776
1	2	ARG	ARG	GLU	GLU	A	A	15 - 776	15 - 776
2	2	ARG	ARG	GLU	GLU	G	G	15 - 776	15 - 776
1	3	ARG	ARG	GLU	GLU	A	A	15 - 776	15 - 776
2	3	ARG	ARG	GLU	GLU	J	J	15 - 776	15 - 776
1	4	ARG	ARG	VAL	VAL	B	B	9 - 717	9 - 717
2	4	ARG	ARG	VAL	VAL	E	E	9 - 717	9 - 717
1	5	ARG	ARG	VAL	VAL	B	B	9 - 717	9 - 717
2	5	ARG	ARG	VAL	VAL	H	H	9 - 717	9 - 717
1	6	ARG	ARG	VAL	VAL	B	B	9 - 717	9 - 717
2	6	ARG	ARG	VAL	VAL	K	K	9 - 717	9 - 717
1	7	ALA	ALA	ALA	ALA	C	C	2 - 166	2 - 166
2	7	ALA	ALA	ALA	ALA	F	F	2 - 166	2 - 166
1	8	ALA	ALA	ALA	ALA	C	C	2 - 166	2 - 166
2	8	ALA	ALA	ALA	ALA	I	I	2 - 166	2 - 166
1	9	ALA	ALA	ALA	ALA	C	C	2 - 166	2 - 166
2	9	ALA	ALA	ALA	ALA	L	L	2 - 166	2 - 166
1	10	ARG	ARG	GLU	GLU	D	D	15 - 776	15 - 776
2	10	ARG	ARG	GLU	GLU	G	G	15 - 776	15 - 776
1	11	ARG	ARG	GLU	GLU	D	D	15 - 776	15 - 776
2	11	ARG	ARG	GLU	GLU	J	J	15 - 776	15 - 776
1	12	ARG	ARG	VAL	VAL	E	E	9 - 717	9 - 717
2	12	ARG	ARG	VAL	VAL	H	H	9 - 717	9 - 717
1	13	ARG	ARG	VAL	VAL	E	E	9 - 717	9 - 717
2	13	ARG	ARG	VAL	VAL	K	K	9 - 717	9 - 717
1	14	ALA	ALA	ALA	ALA	F	F	2 - 166	2 - 166
2	14	ALA	ALA	ALA	ALA	I	I	2 - 166	2 - 166
1	15	ALA	ALA	ALA	ALA	F	F	2 - 166	2 - 166
2	15	ALA	ALA	ALA	ALA	L	L	2 - 166	2 - 166
1	16	ARG	ARG	GLU	GLU	G	G	15 - 776	15 - 776
2	16	ARG	ARG	GLU	GLU	J	J	15 - 776	15 - 776
1	17	ARG	ARG	VAL	VAL	H	H	9 - 717	9 - 717
2	17	ARG	ARG	VAL	VAL	K	K	9 - 717	9 - 717
1	18	ALA	ALA	ALA	ALA	I	I	2 - 166	2 - 166
2	18	ALA	ALA	ALA	ALA	L	L	2 - 166	2 - 166

NCS ensembles :

-
Acetone carboxylase ... , 3 types, 12 molecules ADGJBEHKCFIL

#1: Protein	Acetone carboxylase alpha subunit Mass: 86512.305 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Source: (natural) Xanthobacter autotrophicus Py2 (bacteria) / References: UniProt: Q8RM03, acetone carboxylase
#2: Protein	Acetone carboxylase beta subunit Mass: 78589.867 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Source: (natural) Xanthobacter autotrophicus Py2 (bacteria) / References: UniProt: Q8RM04, acetone carboxylase
#3: Protein	Acetone carboxylase gamma subunit Mass: 19849.793 Da / Num. of mol.: 4 / Source method: isolated from a natural source / Source: (natural) Xanthobacter autotrophicus Py2 (bacteria) / References: UniProt: Q8RM02, acetone carboxylase

-
Non-polymers , 7 types, 4563 molecules

#4: Chemical	ChemComp-MN / MANGANESE (II) ION Mass: 54.938 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Mn
#5: Chemical	ChemComp-ACT / ACETATE ION / Acetate Mass: 59.044 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C₂H₃O₂
#6: Chemical	ChemComp-AE4 / 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL Mass: 266.331 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C₁₂H₂₆O₆
#7: Chemical	... ChemComp-MG / MAGNESIUM ION Mass: 24.305 Da / Num. of mol.: 24 / Source method: obtained synthetically / Formula: Mg
#8: Chemical	ChemComp-AMP / ADENOSINE MONOPHOSPHATE / Adenosine monophosphate Mass: 347.221 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C₁₀H₁₄N₅O₇P / Comment: AMP*YM
#9: Chemical	ChemComp-ZN / ZINC ION Mass: 65.409 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Zn
#10: Water	ChemComp-HOH / water / Water Mass: 18.015 Da / Num. of mol.: 4511 / Source method: isolated from a natural source / Formula: H₂O

-
Experiment

Experiment	Method: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

Crystal	Density Matthews: 2.45 Å³/Da / Density % sol: 50 %
Crystal grow	Temperature: 290 K / Method: vapor diffusion, hanging drop / pH: 7.5 / Details: 300 mM Calcium acetate, 30% (w/v) PEG3350

-
Data collection

Diffraction	Mean temperature: 100 K
Diffraction source	Source: SYNCHROTRON / Site: Diamond / Beamline: I04-1 / Wavelength: 0.92821 Å
Detector	Type: DECTRIS PILATUS 6M-F / Detector: PIXEL / Date: Jul 17, 2016
Radiation	Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelength	Wavelength: 0.92821 Å / Relative weight: 1
Reflection	Resolution: 1.87→126.06 Å / Num. obs: 1990913 / % possible obs: 97.8 % / Observed criterion σ(F): 0 / Observed criterion σ(I): 0 / Redundancy: 3.5 % / CC_1/2: 0.984 / R_merge(I) obs: 0.114 / Net I/av σ(I): 4.4 / Net I/σ(I): 7
Reflection shell	Resolution: 1.87→1.9 Å / Redundancy: 3.2 % / R_merge(I) obs: 0.887 / Mean I/σ(I) obs: 1.2 / CC_1/2: 0.528 / % possible all: 96.8

-
Processing

Software

Name	Version	Classification
REFMAC	5.8.0155	refinement
DIALS		data reduction
xia2		data scaling
PHASER		phasing

Refinement

Method to determine structure:

MOLECULAR REPLACEMENT
Starting model: 5SVC

5svc

Resolution: 1.87→126.06 Å / Cor.coef. F_o:F_c: 0.951 / Cor.coef. F_o:F_c free: 0.935 / SU B: 7.704 / SU ML: 0.11 / Cross valid method: THROUGHOUT / ESU R: 0.154 / ESU R Free: 0.134 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS

	R_factor	Num. reflection	% reflection	Selection details
R_free	0.21694	27977	4.9 %	RANDOM
R_work	0.19169	-	-	-
obs	0.19291	544134	97.34 %	-

Solvent computation

Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å

Displacement parameters

B_iso mean: 20.5 Å²

	B_aniso -1	B_aniso -2	B_aniso -3
1-	-0.25 Å²	0.08 Å²	0.17 Å²
2-	-	-0.2 Å²	-0.29 Å²
3-	-	-	0.15 Å²

Refinement step

Cycle: 1 / Resolution: 1.87→126.06 Å

	Protein	Nucleic acid	Ligand	Solvent	Total
Num. atoms	51312	0	244	4511	56067

Refine LS restraints

Refine-ID	Type	Dev ideal	Dev ideal target	Number
X-RAY DIFFRACTION	r_bond_refined_d	0.014	0.019	52780
X-RAY DIFFRACTION	r_bond_other_d	0.002	0.02	49176
X-RAY DIFFRACTION	r_angle_refined_deg	1.588	1.949	71560
X-RAY DIFFRACTION	r_angle_other_deg	1.01	3	113096
X-RAY DIFFRACTION	r_dihedral_angle_1_deg	6.144	5	6532
X-RAY DIFFRACTION	r_dihedral_angle_2_deg	35.589	23.43	2472
X-RAY DIFFRACTION	r_dihedral_angle_3_deg	13.768	15	8588
X-RAY DIFFRACTION	r_dihedral_angle_4_deg	18.554	15	412
X-RAY DIFFRACTION	r_chiral_restr	0.094	0.2	7608
X-RAY DIFFRACTION	r_gen_planes_refined	0.007	0.021	60128
X-RAY DIFFRACTION	r_gen_planes_other	0.001	0.02	12392
X-RAY DIFFRACTION	r_nbd_refined
X-RAY DIFFRACTION	r_nbd_other
X-RAY DIFFRACTION	r_nbtor_refined
X-RAY DIFFRACTION	r_nbtor_other
X-RAY DIFFRACTION	r_xyhbond_nbd_refined
X-RAY DIFFRACTION	r_xyhbond_nbd_other
X-RAY DIFFRACTION	r_metal_ion_refined
X-RAY DIFFRACTION	r_metal_ion_other
X-RAY DIFFRACTION	r_symmetry_vdw_refined
X-RAY DIFFRACTION	r_symmetry_vdw_other
X-RAY DIFFRACTION	r_symmetry_hbond_refined
X-RAY DIFFRACTION	r_symmetry_hbond_other
X-RAY DIFFRACTION	r_symmetry_metal_ion_refined
X-RAY DIFFRACTION	r_symmetry_metal_ion_other
X-RAY DIFFRACTION	r_mcbond_it	0.61	1.132	26176
X-RAY DIFFRACTION	r_mcbond_other	0.61	1.132	26175
X-RAY DIFFRACTION	r_mcangle_it	1.027	1.694	32684
X-RAY DIFFRACTION	r_mcangle_other	1.027	1.694	32685
X-RAY DIFFRACTION	r_scbond_it	0.992	1.256	26604
X-RAY DIFFRACTION	r_scbond_other	0.992	1.256	26605
X-RAY DIFFRACTION	r_scangle_it
X-RAY DIFFRACTION	r_scangle_other	1.622	1.834	38877
X-RAY DIFFRACTION	r_long_range_B_refined	3.951	13.804	58007
X-RAY DIFFRACTION	r_long_range_B_other	3.947	13.79	57982
X-RAY DIFFRACTION	r_rigid_bond_restr
X-RAY DIFFRACTION	r_sphericity_free
X-RAY DIFFRACTION	r_sphericity_bonded

Refine LS restraints NCS

Refine-ID: X-RAY DIFFRACTION / Type: interatomic distance / Weight position: 0.05

Ens-ID	Dom-ID	Auth asym-ID	Number	Rms dev position (Å)
1	1	A	50422	0.04
1	2	D	50422	0.04
2	1	A	50518	0.04
2	2	G	50518	0.04
3	1	A	50648	0.03
3	2	J	50648	0.03
4	1	B	44472	0.05
4	2	E	44472	0.05
5	1	B	44214	0.06
5	2	H	44214	0.06
6	1	B	44418	0.05
6	2	K	44418	0.05
7	1	C	10544	0.04
7	2	F	10544	0.04
8	1	C	10496	0.06
8	2	I	10496	0.06
9	1	C	10546	0.04
9	2	L	10546	0.04
10	1	D	50564	0.04
10	2	G	50564	0.04
11	1	D	50532	0.04
11	2	J	50532	0.04
12	1	E	44384	0.05
12	2	H	44384	0.05
13	1	E	44374	0.05
13	2	K	44374	0.05
14	1	F	10484	0.05
14	2	I	10484	0.05
15	1	F	10500	0.05
15	2	L	10500	0.05
16	1	G	50526	0.04
16	2	J	50526	0.04
17	1	H	44194	0.06
17	2	K	44194	0.06
18	1	I	10504	0.05
18	2	L	10504	0.05

LS refinement shell

Resolution: 1.87→1.919 Å / Total num. of bins used: 20

	R_factor	Num. reflection	% reflection
R_free	0.341	2084	-
R_work	0.339	39628	-
obs	-	-	95.92 %

Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

ID	L11 (°²)	L12 (°²)	L13 (°²)	L22 (°²)	L23 (°²)	L33 (°²)	S11 (Å °)	S12 (Å °)	S13 (Å °)	S21 (Å °)	S22 (Å °)	S23 (Å °)	S31 (Å °)	S32 (Å °)	S33 (Å °)	T11 (Å²)	T12 (Å²)	T13 (Å²)	T22 (Å²)	T23 (Å²)	T33 (Å²)	Origin x (Å)	Origin y (Å)	Origin z (Å)
1	1.0497	0.9341	-0.2018	2.0836	-0.1311	0.6571	-0.0227	-0.0324	-0.0986	0.0763	-0.0138	-0.3462	0.049	0.1777	0.0365	0.0613	0.0393	-0.0408	0.1014	0.0033	0.0778	-19.883	-78.871	63.552
2	0.1109	-0.0006	0.0279	0.2994	-0.0716	0.2247	-0.0004	-0.0172	0.0009	0.0428	-0.0155	-0.0013	0.008	0.0023	0.016	0.0699	0.008	0.0008	0.0733	-0.024	0.0684	-36.928	-67.706	56.356
3	0.2025	0.0213	0.0146	0.2214	0.0134	0.1893	-0.0226	0.0122	0.0063	-0.0213	0.0084	0.0098	0.0272	-0.0281	0.0142	0.0628	0.0034	0.0064	0.0688	-0.0264	0.0667	-44.147	-73.644	30.734
4	0.8549	0.4832	-0.0424	0.806	0.2293	0.5909	-0.1184	0.1616	-0.0167	-0.1187	0.0878	0.0103	0.0427	-0.0275	0.0305	0.071	0.0011	0.0006	0.0668	-0.0256	0.0223	-38.597	-86.393	12.394
5	0.4045	0.1258	0.1312	0.763	0.5487	1.1028	-0.0399	0.0363	-0.0182	-0.0196	0.0515	-0.1201	0.0486	0.111	-0.0116	0.0199	0.0162	0.0208	0.0591	-0.0204	0.0836	-17.527	-68.104	26.956
6	0.3139	0.0134	-0.0179	0.3246	-0.2774	0.4501	-0.0193	-0.0479	0.0154	-0.0211	0.0645	0.0948	0.0559	-0.154	-0.0452	0.0124	-0.0224	0.008	0.1053	-0.0325	0.0722	-75.485	-84.204	49.792
7	1.1914	0.018	0.7225	0.8244	-0.4047	2.4262	-0.0249	-0.1258	0.1555	0.1369	0.0612	0.1293	-0.1888	-0.3169	-0.0362	0.0463	0.006	0.0381	0.1658	-0.0278	0.0592	-75.159	-84.482	66.467
8	0.2754	-0.3103	0.0285	0.6188	-0.2876	0.2665	-0.0379	-0.0492	-0.0245	0.032	-0.0016	0.0141	0.0305	0.0041	0.0396	0.0876	-0.0278	0.0246	0.136	-0.0365	0.0833	-61.105	-87.283	60.057
9	0.332	0.0042	-0.0043	0.6048	0.0503	0.22	0.0001	-0.0488	-0.0829	-0.0134	-0.0081	0.0158	0.079	-0.1114	0.008	0.0351	-0.0302	0.0003	0.0935	0.0017	0.026	-65.137	-94.806	60.288
10	0.523	0.215	-0.3846	0.4259	-0.4616	0.6957	-0.0681	-0.1002	0.1246	0.0681	0.1009	0.002	-0.0149	-0.0982	-0.0328	0.0783	0.0516	0.0069	0.1953	-0.0651	0.0732	-65.615	-64.849	70.641
11	1.262	-0.259	-0.2495	1.0215	0.8744	2.6892	0.0566	-0.2648	-0.2037	0.0562	0.0053	-0.1083	0.3186	-0.0307	-0.062	0.0969	-0.0377	-0.0234	0.0718	0.0642	0.0771	-57.155	-111.318	75.067
12	2.791	0.6147	0.7686	4.4171	1.5959	3.2515	0.1171	-0.1595	-0.1935	0.1221	-0.0298	0.2104	0.1394	-0.3292	-0.0873	0.069	-0.0153	0.0369	0.0419	0.03	0.116	-45.178	-103.592	41.547
13	1.7385	0.1419	-1.5887	2.0914	1.7964	6.7977	0.0126	-0.0609	-0.1706	0.0679	-0.0299	0.1236	0.2891	-0.0598	0.0173	0.1024	0.0135	-0.0159	0.0138	-0.0046	0.1096	-33.834	-109.548	31.501
14	1.4092	0.5373	0.538	2.0793	-0.3565	2.5668	0.0446	0.1632	-0.1961	-0.1644	-0.0849	-0.0552	0.1667	0.1549	0.0402	0.1083	0.0428	0.0239	0.05	-0.0424	0.1004	-26.32	-103.985	21.032
15	0.8595	-0.3321	0.2141	1.0319	0.0997	0.5156	0.0216	0.0949	-0.01	-0.1775	-0.0429	-0.0292	0.006	-0.0079	0.0213	0.0981	0.0005	0.0095	0.0872	-0.0283	0.0329	-41.623	-79.897	12.531
16	0.3064	-0.2562	0.2267	0.2418	-0.1527	0.4784	-0.0023	0.0195	0.0063	-0.0252	-0.0108	-0.0568	0.0385	0.0293	0.0131	0.1286	0.0047	0.0339	0.0949	-0.0308	0.1386	-31.147	-89.595	18.578
17	2.9673	-2.7401	-2.3587	5.1481	6.6397	9.4873	0.0852	-0.0682	-0.0738	-0.0094	0.2312	-0.167	0.0321	0.3434	-0.3164	0.1024	0.0213	-0.0251	0.0241	0.0123	0.1281	-20.91	-106.559	36.678
18	1.9129	1.2794	0.0983	3.0529	-0.9217	0.5182	0.1091	-0.158	0.2303	0.4034	-0.0405	0.4534	-0.1074	-0.1251	-0.0686	0.1672	0.0131	0.0612	0.1625	-0.0929	0.1157	-41.622	-20.569	68.172
19	0.2052	0.093	0.0193	0.4814	0.0025	0.1711	0.0049	-0.0211	-0.0071	0.0467	-0.0238	-0.0103	0.0007	-0.0102	0.0189	0.0598	0.009	-0.0153	0.0804	-0.0283	0.0715	-28.976	-34.345	53.337
20	0.2604	-0.0453	0.0964	0.4329	0.0177	0.9439	-0.0489	-0.0352	0.022	0.1648	0.0185	-0.0572	0.0102	-0.0075	0.0305	0.0736	-0.003	-0.0273	0.061	-0.0353	0.0739	-27.523	-23.894	59.266
21	0.1689	-0.0216	0.0219	0.1101	-0.0441	0.139	0.0017	0.0033	0.0084	-0.0103	-0.0125	0.0004	-0.0122	0.0006	0.0109	0.056	0.0161	-0.0126	0.0715	-0.0313	0.0892	-32.536	-26.437	30.13
22	0.222	-0.2571	0.0247	1.9424	0.0617	0.2085	-0.0179	0.0095	0.0292	-0.0377	-0.004	-0.0644	-0.0027	0.0176	0.022	0.0385	0.014	-0.0097	0.0755	-0.0212	0.0694	-25.635	-17.542	17.9
23	0.3133	0.0852	-0.2567	0.2655	-0.153	0.3263	0.0072	0.0488	0.0054	-0.0386	0.0033	0.0359	0.0039	-0.0228	-0.0105	0.0298	0.0302	-0.0245	0.0722	-0.0175	0.0598	-43.654	-12.12	13.883
24	0.3242	-0.2082	0.2941	0.4291	-0.4145	1.0976	-0.0151	-0.0265	-0.0131	0.0264	0.0408	0.1314	-0.0075	-0.1121	-0.0258	0.0064	0.0158	-0.0007	0.0683	-0.0286	0.1076	-57.592	-30.903	34.87
25	0.1722	0.0383	0.0591	0.1411	0.0957	0.4043	-0.0132	0.0227	0.0062	-0.0173	-0.0004	-0.0405	-0.0332	0.1053	0.0137	0.0145	0.0041	-0.0209	0.0815	0.0024	0.0831	4.377	-14.504	34.41
26	0.661	0.18	0.4611	0.6825	0.1801	1.6667	-0.0359	0.0893	-0.0782	0.059	-0.0235	-0.0855	0.0806	0.2543	0.0594	0.045	0.0106	-0.0312	0.1221	-0.0015	0.0908	10.355	-14.189	49.866
27	0.1799	-0.0611	-0.0638	0.5786	0.5866	0.8199	-0.0402	-0.0152	0.0276	0.1043	-0.011	-0.0371	0.0571	0.0592	0.0511	0.0401	0.0007	-0.0389	0.0744	-0.0168	0.089	-4.958	-11.648	49.283
28	0.3567	-0.0363	0.0744	0.2264	0.0567	0.1649	-0.0247	0.0604	0.0618	-0.0473	-0.0086	0.0316	-0.063	0.08	0.0333	0.0427	-0.0112	-0.0313	0.0708	-0.0196	0.0696	-1.244	-3.902	47.682
29	1.3226	0.9207	0.4168	0.7104	0.2072	0.3671	0.024	0.0076	-0.1354	0.0382	0.0114	-0.0881	0.0493	0.0841	-0.0354	0.0604	0.0632	-0.0248	0.1015	-0.0305	0.0711	3.519	-33.927	56.459
30	1.3939	-0.457	0.7247	0.5757	-0.2931	1.9069	-0.0796	-0.1741	0.1659	0.135	0.0022	0.0528	-0.2283	0.0355	0.0774	0.1006	-0.0127	-0.0322	0.0465	-0.0531	0.1221	-3.314	12.398	64.919
31	5.1719	-0.0586	-0.6036	4.8588	-0.2899	7.5572	0.0895	0.0524	0.3096	-0.0411	0.0594	-0.085	-0.3876	0.0896	-0.1489	0.0547	-0.022	0.0037	0.026	-0.0339	0.1276	-27.5	7.932	35.414
32	3.5846	-2.9741	-2.9618	4.2984	0.2524	5.1118	-0.0236	-0.1689	0.0048	0.1033	-0.095	-0.0868	-0.1079	0.4212	0.1186	0.0758	-0.0299	-0.048	0.0798	-0.0343	0.1204	-25.576	0.134	42.821
33	3.0439	-1.1521	2.1856	2.1886	-1.3193	4.7413	-0.0038	-0.0027	0.0592	0.0834	0.0471	-0.069	-0.2064	0.0346	-0.0433	0.0761	0.0218	0.0074	0.0225	-0.0329	0.0861	-40.923	10.563	33.73
34	5.3758	-2.4007	-4.8903	4.7681	2.7428	4.5406	-0.0101	-0.0162	0.0702	-0.0986	0.06	-0.1207	-0.0239	0.0058	-0.0499	0.0823	0.0526	-0.0365	0.0806	-0.0463	0.1211	-45.751	4.644	28.173
35	5.2953	-3.1458	-1.4888	4.2235	0.8034	4.0668	0.1322	0.432	0.5244	-0.213	-0.1011	0.1495	-0.4336	-0.5404	-0.0311	0.1316	0.0557	-0.0347	0.1106	0.0199	0.2292	-54.552	11.728	28.559
36	1.2779	0.8783	-0.0796	3.5004	-0.3679	5.2752	0.0215	0.0626	0.1759	-0.0911	0.0355	0.2326	0.139	-0.2546	-0.0569	0.0474	0.039	-0.0178	0.0633	-0.0086	0.1291	-53.174	0.644	24.543
37	5.9925	-4.3538	-1.2542	6.5341	1.4547	0.3511	0.0776	0.2535	-0.0157	-0.1818	-0.1164	0.2257	-0.035	-0.0525	0.0388	0.0915	0.018	-0.0472	0.1305	-0.0165	0.0327	-43.641	-14.7	10.462
38	2.337	0.4733	-0.8208	1.4551	-0.9179	0.7698	-0.0259	0.1095	0.1766	-0.0798	0.0565	0.1162	0.0464	-0.05	-0.0306	0.0812	0.032	-0.032	0.0972	-0.0266	0.1179	-38.002	-22.644	14.799
39	1.6042	1.0816	-0.6608	3.7622	-1.8744	3.3049	0.0096	-0.0479	0.0098	0.0823	-0.0211	0.0535	-0.0771	-0.027	0.0114	0.0396	0.0363	-0.0245	0.0752	-0.015	0.1116	-45.233	-5.567	18.001
40	0.2514	0.083	0.013	0.159	-0.0551	0.0277	0.0195	0.0443	0.0759	0.0908	0.0153	0.1098	-0.0351	0.0002	-0.0348	0.1167	0.0341	0.0003	0.1168	-0.032	0.1585	-51.451	-13.114	27.054
41	5.0225	-5.3896	3.469	7.0698	-5.8423	6.0307	-0.0411	-0.0273	-0.0275	0.3336	0.1468	0.1115	-0.3764	-0.1846	-0.1057	0.1774	0.0511	0.0528	0.0489	-0.0424	0.1164	-51.037	7.47	43.255
42	1.4264	-0.6838	0.3757	1.9359	0.5384	0.6349	0.0212	0.1069	0.0893	-0.225	0.0126	-0.2985	-0.0492	0.1572	-0.0338	0.0804	0.0101	0.0471	0.0669	0.0207	0.0618	-14.901	-92.41	88.166
43	0.1975	-0.0382	-0.0104	0.257	-0.068	0.3071	0.0058	0.0218	-0.0026	-0.0298	-0.0281	-0.0063	0.0023	-0.0181	0.0222	0.0627	0.0322	0.004	0.0744	-0.0433	0.0813	-28.085	-105.734	102.933
44	0.2501	-0.1595	0.1207	0.1673	-0.1261	0.9241	-0.014	0.0274	0.0314	-0.0503	-0.0093	-0.0062	0.0512	-0.0129	0.0233	0.0878	0.038	-0.0105	0.0872	-0.0278	0.0929	-29.121	-95.152	97.168
45	0.1632	-0.0451	-0.0001	0.1813	-0.0592	0.1961	-0.0114	-0.0108	0.0347	0.0174	-0.0394	-0.0672	-0.0081	0.0164	0.0508	0.0453	0.0221	-0.0098	0.0574	-0.0333	0.1148	-11.6	-97.608	120.858
46	0.1919	0.013	0.044	0.1745	-0.0133	0.1813	0.0084	-0.0204	0.0144	0.0371	-0.0209	-0.0013	-0.0099	-0.021	0.0125	0.0519	0.0209	-0.0072	0.0689	-0.0446	0.0901	-28.711	-99.09	128.517
47	0.3782	-0.2085	-0.2027	0.3625	0.1511	0.2588	-0.0372	-0.0384	0.0298	0.0456	0.0252	-0.0208	-0.0043	0.0005	0.012	0.0383	0.0202	-0.0258	0.0532	-0.0462	0.0753	-17.631	-83.556	141.486
48	0.4704	0.3403	0.2563	0.5174	0.2784	0.735	-0.0186	0.0168	-0.0093	-0.0411	0.0149	-0.125	-0.017	0.0737	0.0037	0.0132	0.0206	0.0066	0.0679	-0.0379	0.1217	0.776	-103.885	121.192
49	2.3676	-0.2956	0.0486	2.9061	1.2007	4.0763	0.1291	0.1482	0.0204	-0.124	-0.1154	0.3369	-0.3233	-0.2385	-0.0137	0.069	0.0921	-0.0446	0.1514	-0.0604	0.1507	-72.833	-71.472	102.893
50	0.2365	0.0131	-0.0152	0.3238	-0.0436	0.1682	0.0022	-0.0325	0.027	0.0483	-0.0347	0.0855	-0.0419	-0.0564	0.0325	0.0279	0.035	-0.0101	0.0988	-0.0778	0.0872	-57.51	-88.335	126.794
51	0.7936	-0.1677	0.5859	0.7959	-0.3026	0.7498	0.0242	-0.044	-0.1608	-0.0672	-0.0618	0.213	0.0204	-0.0546	0.0376	0.0883	0.0677	-0.0721	0.1511	-0.1026	0.2517	-66.448	-84.667	106.693
52	0.7213	-0.1647	-0.1215	0.9477	-0.0065	0.2874	0.0623	0.0369	0.0988	-0.0109	-0.1034	0.0631	-0.0719	-0.0688	0.0411	0.0587	0.0591	-0.0361	0.072	-0.0503	0.0617	-51.598	-66.247	112.839
53	0.6755	0.0582	-0.1986	1.042	-0.0952	0.1599	0.0066	0.045	-0.0995	-0.0259	-0.0532	0.0641	-0.0413	-0.117	0.0466	0.0237	0.0543	-0.0277	0.1346	-0.0533	0.0677	-56.231	-86.944	103.979
54	1.3174	-1.0182	0.1737	1.2639	-0.1194	0.4478	-0.0404	0.1123	-0.2225	-0.0633	-0.0973	0.2472	0.0545	-0.1363	0.1377	0.0563	-0.008	-0.0245	0.1788	-0.1101	0.1753	-60.445	-104.658	99.844
55	1.2694	0.232	0.7753	0.9257	0.7261	3.0527	0.0808	0.3454	0.1678	-0.1138	-0.066	-0.0704	-0.3247	-0.096	-0.0148	0.1392	0.1358	-0.0054	0.192	0.0291	0.0724	-52.425	-58.399	91.783
56	2.8092	0.4244	-0.511	3.2549	0.6797	3.7553	-0.0456	0.0981	0.147	-0.114	-0.0211	0.2035	-0.2778	-0.2062	0.0667	0.077	0.0554	-0.0107	0.0474	0.0108	0.1637	-28.607	-66.884	118.215
57	3.6005	2.9773	1.1541	5.2898	4.6008	5.7378	-0.0337	0.0952	0.2208	-0.1785	-0.0227	0.0842	-0.3437	-0.1582	0.0564	0.0844	0.0404	-0.0244	0.0232	-0.0048	0.179	-17.538	-61.803	120.513
58	3.2801	-0.5257	-0.9213	2.3069	-0.4925	1.9755	-0.0463	-0.0368	0.2826	0.0663	0.039	-0.224	-0.221	0.1211	0.0074	0.0868	-0.0211	-0.032	0.0274	-0.0478	0.1774	-5.61	-63.903	128.974
59	0.8132	0.9811	-0.1899	1.8646	-0.1833	0.2275	0.0163	-0.1146	-0.006	0.1329	-0.0768	-0.1371	0.0246	0.0038	0.0604	0.0449	0.0247	-0.0378	0.0768	-0.0559	0.1001	-11.49	-87.009	140.085
60	0.2969	0.0386	-0.1517	0.0078	0.0045	0.7304	0.0021	-0.0329	0.0473	-0.0066	-0.0098	-0.0059	-0.064	-0.0237	0.0078	0.0805	0.0148	-0.0164	0.0802	-0.0423	0.164	-7.521	-81.913	134.093
61	8.1841	7.169	5.3981	7.0801	6.6759	9.4184	-0.1179	0.2769	0.1982	-0.2721	0.2007	-0.0806	-0.3723	0.1637	-0.0827	0.0805	0.027	0.0642	0.0237	0.038	0.2578	-4.284	-64.996	113.418
62	1.4414	-1.0569	-0.5893	3.264	0.0165	0.7017	-0.0724	0.0547	-0.059	-0.1768	0.0282	0.5285	0.0537	-0.1788	0.0442	0.1179	-0.0341	-0.0602	0.1172	-0.0517	0.1438	-39.313	-149.678	92.48
63	0.2067	0.0862	-0.0343	0.5376	-0.0162	0.2222	-0.0155	0.0112	0.0089	-0.0812	0.0017	-0.0111	0.0377	-0.0215	0.0138	0.0816	0.0235	0.0049	0.0594	-0.0476	0.0563	-21.673	-139.372	99.64
64	0.1822	-0.0109	-0.0295	0.1901	-0.0138	0.1864	-0.004	-0.0164	0.0041	0.0277	0.0071	-0.018	0.0443	0.013	-0.0031	0.0737	0.0253	0.0006	0.054	-0.0405	0.0687	-15.39	-144.293	124.238
65	0.5011	-0.2036	-0.2259	0.5376	-0.1073	0.4599	-0.0556	-0.1047	0.0056	0.0991	-0.0012	-0.074	0.0931	0.0598	0.0568	0.1021	0.0246	-0.0124	0.058	-0.019	0.0341	-16.01	-159.776	140.245
66	0.168	-0.0912	0.0353	0.6927	-0.4467	1.3704	-0.0075	-0.0036	0.0055	0.0605	0.0807	0.0978	0.0258	-0.1499	-0.0732	0.0178	0.0064	0.0165	0.0595	-0.0306	0.0858	-40.894	-139.182	129.157
67	0.1514	0.02	-0.003	0.3265	0.2905	0.4534	-0.018	0.0308	0.0307	0.0206	0.0803	-0.0871	0.0607	0.1546	-0.0623	0.0514	0.0568	-0.0095	0.1112	-0.0336	0.0792	15.955	-157.987	105.729
68	0.6281	0.3587	0.7216	0.4189	0.7517	1.459	-0.0404	0.097	0.1641	-0.0606	0.0336	0.0027	-0.0655	0.2112	0.0067	0.1162	0.0258	0.0097	0.2042	-0.0189	0.0969	15.424	-158.183	89.009
69	0.3024	-0.0029	0.0523	0.7425	0.1205	0.3706	0.0092	0.0081	-0.0444	0.0132	0.0106	-0.0396	0.067	0.1156	-0.0198	0.0829	0.0623	0.0094	0.0759	-0.0282	0.08	4.314	-173.455	98.963
70	0.888	-1.3165	0.6747	3.442	-0.9073	1.0612	-0.0274	-0.0687	-0.0968	0.2444	0.0219	0.0662	0.0961	-0.0318	0.0056	0.1284	0.0349	0.0324	0.0553	-0.015	0.1044	-3.554	-182.495	102.421
71	0.7555	-0.1195	-0.1187	0.4001	0.055	0.2129	0.0122	0.0611	0.1199	0.0087	0.0394	-0.0453	-0.0085	0.0699	-0.0516	0.0314	0.016	0.0047	0.0898	-0.0271	0.0388	7.665	-144.436	86.599
72	0.5007	0.2714	-0.442	1.1571	-0.4597	2.6712	-0.0284	0.114	-0.1009	-0.0419	0.0525	0.1368	0.2274	-0.026	-0.0242	0.0611	0.0367	-0.0159	0.0713	-0.0573	0.1027	-4.067	-184.087	80.591
73	5.9584	-0.4514	-0.2831	3.4325	-1.916	2.7584	-0.0697	-0.1003	-0.3624	0.0135	0.0482	-0.0609	0.3937	0.1821	0.0215	0.1921	0.0576	0.0062	0.0647	-0.0733	0.1737	-14.753	-179.181	117.391
74	0.8666	0.6579	-0.8106	1.5602	-1.1684	2.461	-0.0141	-0.0204	-0.1635	-0.0655	0.0032	-0.0699	0.2594	0.0436	0.0109	0.1302	0.0258	-0.0146	0.0316	-0.0369	0.1054	-24.159	-177.517	121.77
75	5.6564	5.7582	0.6949	6.364	1.8969	3.7355	0.2342	-0.2431	-0.3539	0.4328	-0.244	-0.1832	0.3853	-0.1789	0.0098	0.2501	-0.0187	0.0455	0.0856	0.0765	0.2747	-37.287	-181.908	134.142
76	0.4631	-0.5326	-0.1238	4.8071	-0.0943	1.9072	-0.0193	-0.1055	-0.1338	0.0696	0.0344	0.2313	0.086	-0.165	-0.015	0.1433	-0.0113	0.0213	0.07	-0.0001	0.0913	-34.07	-170.935	137.155
77	1.2806	1.4171	-0.3141	2.8314	-0.5787	0.626	0.0404	-0.1257	-0.003	0.2336	-0.0576	0.0098	0.0169	0.0642	0.0171	0.1297	0.0282	-0.0107	0.0796	-0.0328	0.0234	-17.225	-152.305	143.312
78	0.277	0.0654	0.3309	0.0209	0.0865	0.431	0.0041	-0.0478	0.007	0.0206	-0.0231	0.0233	0.0833	-0.0462	0.019	0.1605	0.0034	0.0285	0.0912	-0.0275	0.1206	-28.251	-161.354	137.245
79	0.8082	1.5775	-1.3197	4.8666	-6.2414	9.891	0.0172	0.1199	-0.0506	-0.1176	0.3525	0.1174	0.143	-0.4192	-0.3697	0.1036	-0.0104	-0.0326	0.038	-0.0218	0.0991	-39.427	-177.692	119.128

Refinement TLS group

ID	Refine-ID	Refine TLS-ID	Auth asym-ID	Auth seq-ID
1	X-RAY DIFFRACTION	1	A	15 - 53
2	X-RAY DIFFRACTION	2	A	54 - 282
3	X-RAY DIFFRACTION	3	A	283 - 657
4	X-RAY DIFFRACTION	4	A	658 - 724
5	X-RAY DIFFRACTION	5	A	725 - 776
6	X-RAY DIFFRACTION	6	B	9 - 254
7	X-RAY DIFFRACTION	7	B	255 - 300
8	X-RAY DIFFRACTION	8	B	301 - 355
9	X-RAY DIFFRACTION	9	B	356 - 556
10	X-RAY DIFFRACTION	10	B	557 - 642
11	X-RAY DIFFRACTION	11	B	643 - 717
12	X-RAY DIFFRACTION	12	C	2 - 30
13	X-RAY DIFFRACTION	13	C	31 - 54
14	X-RAY DIFFRACTION	14	C	55 - 91
15	X-RAY DIFFRACTION	15	C	92 - 118
16	X-RAY DIFFRACTION	16	C	119 - 149
17	X-RAY DIFFRACTION	17	C	150 - 166
18	X-RAY DIFFRACTION	18	D	15 - 53
19	X-RAY DIFFRACTION	19	D	54 - 226
20	X-RAY DIFFRACTION	20	D	227 - 282
21	X-RAY DIFFRACTION	21	D	283 - 609
22	X-RAY DIFFRACTION	22	D	610 - 657
23	X-RAY DIFFRACTION	23	D	658 - 724
24	X-RAY DIFFRACTION	24	D	725 - 776
25	X-RAY DIFFRACTION	25	E	9 - 254
26	X-RAY DIFFRACTION	26	E	255 - 300
27	X-RAY DIFFRACTION	27	E	301 - 355
28	X-RAY DIFFRACTION	28	E	356 - 556
29	X-RAY DIFFRACTION	29	E	557 - 642
30	X-RAY DIFFRACTION	30	E	643 - 717
31	X-RAY DIFFRACTION	31	F	2 - 17
32	X-RAY DIFFRACTION	32	F	18 - 30
33	X-RAY DIFFRACTION	33	F	31 - 54
34	X-RAY DIFFRACTION	34	F	55 - 63
35	X-RAY DIFFRACTION	35	F	64 - 74
36	X-RAY DIFFRACTION	36	F	75 - 91
37	X-RAY DIFFRACTION	37	F	92 - 104
38	X-RAY DIFFRACTION	38	F	105 - 118
39	X-RAY DIFFRACTION	39	F	119 - 134
40	X-RAY DIFFRACTION	40	F	135 - 149
41	X-RAY DIFFRACTION	41	F	150 - 166
42	X-RAY DIFFRACTION	42	G	15 - 53
43	X-RAY DIFFRACTION	43	G	54 - 226
44	X-RAY DIFFRACTION	44	G	227 - 282
45	X-RAY DIFFRACTION	45	G	283 - 362
46	X-RAY DIFFRACTION	46	G	363 - 621
47	X-RAY DIFFRACTION	47	G	622 - 724
48	X-RAY DIFFRACTION	48	G	725 - 776
49	X-RAY DIFFRACTION	49	H	9 - 61
50	X-RAY DIFFRACTION	50	H	62 - 254
51	X-RAY DIFFRACTION	51	H	255 - 300
52	X-RAY DIFFRACTION	52	H	301 - 432
53	X-RAY DIFFRACTION	53	H	433 - 556
54	X-RAY DIFFRACTION	54	H	557 - 642
55	X-RAY DIFFRACTION	55	H	643 - 717
56	X-RAY DIFFRACTION	56	I	2 - 30
57	X-RAY DIFFRACTION	57	I	31 - 44
58	X-RAY DIFFRACTION	58	I	45 - 82
59	X-RAY DIFFRACTION	59	I	83 - 118
60	X-RAY DIFFRACTION	60	I	119 - 149
61	X-RAY DIFFRACTION	61	I	150 - 166
62	X-RAY DIFFRACTION	62	J	15 - 53
63	X-RAY DIFFRACTION	63	J	54 - 282
64	X-RAY DIFFRACTION	64	J	283 - 621
65	X-RAY DIFFRACTION	65	J	622 - 724
66	X-RAY DIFFRACTION	66	J	725 - 776
67	X-RAY DIFFRACTION	67	K	9 - 254
68	X-RAY DIFFRACTION	68	K	255 - 300
69	X-RAY DIFFRACTION	69	K	301 - 413
70	X-RAY DIFFRACTION	70	K	414 - 459
71	X-RAY DIFFRACTION	71	K	460 - 642
72	X-RAY DIFFRACTION	72	K	643 - 717
73	X-RAY DIFFRACTION	73	L	2 - 17
74	X-RAY DIFFRACTION	74	L	18 - 63
75	X-RAY DIFFRACTION	75	L	64 - 74
76	X-RAY DIFFRACTION	76	L	75 - 91
77	X-RAY DIFFRACTION	77	L	92 - 118
78	X-RAY DIFFRACTION	78	L	119 - 149
79	X-RAY DIFFRACTION	79	L	150 - 166

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

Version 3 of the EMDB header file is now the official format.
The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

+
Jul 12, 2017. Major update of PDB

-
Yorodumi

Thousand views of thousand structures

Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

-
Movie

-
Structure viewers

+
Viewer log

-
This page

-
This web site

-
Options

+
Open data

-
Basic information

-
Structure visualization

-
Downloads & links

-
Download

-
Validation report

-
Related structure data

-
Links

-
Assembly

-
Components

-
Acetone carboxylase ... , 3 types, 12 molecules ADGJBEHKCFIL

-
Non-polymers , 7 types, 4563 molecules

-
Experimental details

-
Experiment

-
Sample preparation

-
Data collection

-
Processing

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

-
Aug 12, 2020. Covid-19 info

+
Mar 5, 2020. Novel coronavirus structure data

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

+
Jul 12, 2017. Major update of PDB

-
Yorodumi

-Movie

-Structure viewers

+Viewer log

-This page

-This web site

-Options

+Open data

-Basic information

-Structure visualization

-Downloads & links

-Download

-Validation report

-Related structure data

-Links

-Assembly

-Components

-Acetone carboxylase ... , 3 types, 12 molecules ADGJBEHKCFIL

-Non-polymers , 7 types, 4563 molecules

-Experimental details

-Experiment

-Sample preparation

-Data collection

-Processing

+About Yorodumi

-News

-Feb 9, 2022. New format data for meta-information of EMDB entries

-Aug 12, 2020. Covid-19 info

+Mar 5, 2020. Novel coronavirus structure data

+Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

+Jul 12, 2017. Major update of PDB

-Yorodumi

-
Movie

-
Structure viewers

+
Viewer log

-
This page

-
This web site

-
Options

+
Open data

-
Basic information

-
Structure visualization

-
Downloads & links

-
Download

-
Validation report

-
Related structure data

-
Links

-
Assembly

-
Components

-
Acetone carboxylase ... , 3 types, 12 molecules ADGJBEHKCFIL

-
Non-polymers , 7 types, 4563 molecules

-
Experimental details

-
Experiment

-
Sample preparation

-
Data collection

-
Processing

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

-
Aug 12, 2020. Covid-19 info

+
Mar 5, 2020. Novel coronavirus structure data

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

+
Jul 12, 2017. Major update of PDB

-
Yorodumi