+
Open data
-
Basic information
Entry | Database: PDB / ID: 5fzs | ||||||
---|---|---|---|---|---|---|---|
Title | Designed TPR Protein M4N delta C (CF II) | ||||||
![]() | DESIGNED TPR PROTEIN | ||||||
![]() | UNKNOWN FUNCTION / TETRATRICOPEPTIDE REPEAT | ||||||
Function / homology | Tetratricopeptide repeat domain / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat / Alpha Horseshoe / Mainly Alpha![]() | ||||||
Biological species | SYNTHETIC CONSTRUCT (others) | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Albrecht, R. / Zhu, H. / Hartmann, M.D. | ||||||
![]() | ![]() Title: Origin of a folded repeat protein from an intrinsically disordered ancestor. Authors: Zhu, H. / Sepulveda, E. / Hartmann, M.D. / Kogenaru, M. / Ursinus, A. / Sulz, E. / Albrecht, R. / Coles, M. / Martin, J. / Lupas, A.N. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 50.8 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 38.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 414.2 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 414.2 KB | Display | |
Data in XML | ![]() | 6.3 KB | Display | |
Data in CIF | ![]() | 7.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 5fzqSC ![]() 5fzrC S: Starting model for refinement C: citing same article ( |
---|---|
Similar structure data |
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 | ![]()
| ||||||||
Unit cell |
|
-
Components
#1: Protein | Mass: 11831.779 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) SYNTHETIC CONSTRUCT (others) / Production host: ![]() ![]() |
---|---|
#2: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.1 Å3/Da / Density % sol: 43 % / Description: NONE |
---|
-Data collection
Diffraction | Mean temperature: 100 K |
---|---|
Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Apr 10, 2014 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1 Å / Relative weight: 1 |
Reflection | Resolution: 1.65→34.3 Å / Num. obs: 13476 / % possible obs: 99.6 % / Observed criterion σ(I): -3 / Redundancy: 9.21 % / Biso Wilson estimate: 25.17 Å2 / Rmerge(I) obs: 0.04 / Net I/σ(I): 32.6 |
Reflection shell | Resolution: 1.65→1.75 Å / Redundancy: 9.44 % / Rmerge(I) obs: 0.71 / Mean I/σ(I) obs: 3.28 / % possible all: 99 |
-
Processing
Software |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method to determine structure: ![]() Starting model: PDB ENTRY 5FZQ Resolution: 1.652→34.33 Å / SU ML: 0.19 / σ(F): 1.36 / Phase error: 22.2 / Stereochemistry target values: ML
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | Shrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.652→34.33 Å
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LS refinement shell |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement TLS params. | Method: refined / Origin x: 15.9045 Å / Origin y: 19.1758 Å / Origin z: 20.5453 Å
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement TLS group | Selection details: (CHAIN A) |