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Open data
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Basic information
Entry | Database: PDB / ID: 5fzr | ||||||
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Title | Designed TPR Protein M4N delta C (CF I) | ||||||
![]() | DESIGNED TPR PROTEIN | ||||||
![]() | UNKNOWN FUNCTION / TETRATRICOPEPTIDE REPEAT | ||||||
Function / homology | Tetratricopeptide repeat domain / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat / Alpha Horseshoe / Mainly Alpha![]() | ||||||
Biological species | SYNTHETIC CONSTRUCT (others) | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Albrecht, R. / Zhu, H. / Hartmann, M.D. | ||||||
![]() | ![]() Title: Origin of a folded repeat protein from an intrinsically disordered ancestor. Authors: Zhu, H. / Sepulveda, E. / Hartmann, M.D. / Kogenaru, M. / Ursinus, A. / Sulz, E. / Albrecht, R. / Coles, M. / Martin, J. / Lupas, A.N. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 168.8 KB | Display | ![]() |
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PDB format | ![]() | 137.4 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 5fzqSC ![]() 5fzsC S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 11831.779 Da / Num. of mol.: 4 Source method: isolated from a genetically manipulated source Source: (gene. exp.) SYNTHETIC CONSTRUCT (others) / Production host: ![]() ![]() #2: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.1 Å3/Da / Density % sol: 42 % / Description: NONE |
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-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Mar 22, 2014 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.071 Å / Relative weight: 1 |
Reflection | Resolution: 2.05→38.3 Å / Num. obs: 25655 / % possible obs: 98.4 % / Observed criterion σ(I): -3 / Redundancy: 5.58 % / Biso Wilson estimate: 36.2 Å2 / Rmerge(I) obs: 0.06 / Net I/σ(I): 18.4 |
Reflection shell | Resolution: 2.05→2.17 Å / Redundancy: 5.69 % / Rmerge(I) obs: 0.71 / Mean I/σ(I) obs: 2.1 / % possible all: 94.1 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: PDB ENTRY 5FZQ Resolution: 2.045→38.252 Å / SU ML: 0.31 / σ(F): 1.36 / Phase error: 34.27 / Stereochemistry target values: ML
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Solvent computation | Shrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.045→38.252 Å
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Refine LS restraints |
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LS refinement shell |
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Refinement TLS params. | Method: refined / Refine-ID: X-RAY DIFFRACTION
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Refinement TLS group |
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