- PDB-5eay: Crystal structure of a Dna2 peptide in complex with Rpa 70N -
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Entry
Database: PDB / ID: 5eay
Title
Crystal structure of a Dna2 peptide in complex with Rpa 70N
Components
DNA replication ATP-dependent helicase/nuclease DNA2
Replication protein A 70 kDa DNA-binding subunit
Keywords
DNA BINDING PROTEIN
Function / homology
Function and homology information
: / DNA replication, Okazaki fragment processing / protein localization to chromosome / site-specific endodeoxyribonuclease activity, specific for altered base / telomere maintenance via semi-conservative replication / DNA replication factor A complex / mitochondrial DNA replication / t-circle formation / G-quadruplex DNA unwinding / mitotic telomere maintenance via semi-conservative replication ...: / DNA replication, Okazaki fragment processing / protein localization to chromosome / site-specific endodeoxyribonuclease activity, specific for altered base / telomere maintenance via semi-conservative replication / DNA replication factor A complex / mitochondrial DNA replication / t-circle formation / G-quadruplex DNA unwinding / mitotic telomere maintenance via semi-conservative replication / chromatin-protein adaptor activity / 5'-flap endonuclease activity / DNA double-strand break processing / DNA replication, removal of RNA primer / nuclease activity / DNA replication checkpoint signaling / Removal of the Flap Intermediate / single-stranded telomeric DNA binding / replication fork reversal / protein localization to site of double-strand break / Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) / Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) / Removal of the Flap Intermediate from the C-strand / G-rich strand telomeric DNA binding / Homologous DNA Pairing and Strand Exchange / Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) / Resolution of D-loop Structures through Holliday Junction Intermediates / single-stranded DNA helicase activity / HDR through Single Strand Annealing (SSA) / Impaired BRCA2 binding to RAD51 / mitochondrial DNA repair / mitochondrial nucleoid / site of DNA damage / Presynaptic phase of homologous DNA pairing and strand exchange / telomere maintenance via telomerase / Activation of the pre-replicative complex / PCNA-Dependent Long Patch Base Excision Repair / Regulation of HSF1-mediated heat shock response / HSF1 activation / mismatch repair / Activation of ATR in response to replication stress / SUMOylation of DNA damage response and repair proteins / DNA helicase activity / telomere maintenance / Translesion synthesis by REV1 / Translesion synthesis by POLK / helicase activity / Translesion synthesis by POLI / Gap-filling DNA repair synthesis and ligation in GG-NER / meiotic cell cycle / regulation of signal transduction by p53 class mediator / positive regulation of DNA replication / nucleotide-excision repair / Fanconi Anemia Pathway / Recognition of DNA damage by PCNA-containing replication complex / Termination of translesion DNA synthesis / Translesion Synthesis by POLH / double-strand break repair via homologous recombination / base-excision repair / G2/M DNA damage checkpoint / HDR through Homologous Recombination (HRR) / Dual Incision in GG-NER / DNA-templated DNA replication / PML body / Meiotic recombination / Formation of Incision Complex in GG-NER / Dual incision in TC-NER / Gap-filling DNA repair synthesis and ligation in TC-NER / site of double-strand break / single-stranded DNA binding / Processing of DNA double-strand break ends / 4 iron, 4 sulfur cluster binding / 5'-3' DNA helicase activity / DNA recombination / DNA replication / DNA helicase / Regulation of TP53 Activity through Phosphorylation / chromosome, telomeric region / damaged DNA binding / Hydrolases; Acting on ester bonds / DNA repair / DNA damage response / ATP hydrolysis activity / mitochondrion / DNA binding / RNA binding / nucleoplasm / ATP binding / nucleus / metal ion binding / cytoplasm Similarity search - Function
DNA replication factor Dna2, N-terminal / DNA replication ATP-dependent helicase/nuclease Dna2 / DNA replication factor Dna2 / Replication factor-A protein 1, N-terminal domain / Replication factor A protein 1 / Replication factor-A protein 1, N-terminal / Replication protein A, OB domain / Replication protein A OB domain / : / Replication factor A, C-terminal ...DNA replication factor Dna2, N-terminal / DNA replication ATP-dependent helicase/nuclease Dna2 / DNA replication factor Dna2 / Replication factor-A protein 1, N-terminal domain / Replication factor A protein 1 / Replication factor-A protein 1, N-terminal / Replication protein A, OB domain / Replication protein A OB domain / : / Replication factor A, C-terminal / Replication factor-A C terminal domain / DNA2/NAM7 helicase, helicase domain / AAA domain / OB-fold nucleic acid binding domain, AA-tRNA synthetase-type / OB-fold nucleic acid binding domain / Nucleic acid-binding proteins / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / DNA2/NAM7 helicase-like, C-terminal / AAA domain / Nucleic acid-binding, OB-fold / Beta Barrel / P-loop containing nucleoside triphosphate hydrolase / Mainly Beta Similarity search - Domain/homology
Replication protein A 70 kDa DNA-binding subunit / DNA replication ATP-dependent helicase/nuclease DNA2 Similarity search - Component
A: Replication protein A 70 kDa DNA-binding subunit B: Replication protein A 70 kDa DNA-binding subunit C: Replication protein A 70 kDa DNA-binding subunit D: Replication protein A 70 kDa DNA-binding subunit E: DNA replication ATP-dependent helicase/nuclease DNA2 F: DNA replication ATP-dependent helicase/nuclease DNA2 G: DNA replication ATP-dependent helicase/nuclease DNA2 H: DNA replication ATP-dependent helicase/nuclease DNA2
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