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Yorodumi- PDB-4v5v: Structure of respiratory syncytial virus nucleocapsid protein, P1... -
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Basic information
| Entry | Database: PDB / ID: 4v5v | |||||||||
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| Title | Structure of respiratory syncytial virus nucleocapsid protein, P1 crystal form | |||||||||
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Keywords | VIRAL PROTEIN/RNA / VIRAL PROTEIN-RNA COMPLEX | |||||||||
| Function / homology | Function and homology informationsymbiont-mediated suppression of host PKR/eIFalpha signaling / : / helical viral capsid / protein serine/threonine kinase inhibitor activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity / viral nucleocapsid / symbiont-mediated suppression of host NF-kappaB cascade / host cell cytoplasm / symbiont-mediated suppression of host type I interferon-mediated signaling pathway ...symbiont-mediated suppression of host PKR/eIFalpha signaling / : / helical viral capsid / protein serine/threonine kinase inhibitor activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity / viral nucleocapsid / symbiont-mediated suppression of host NF-kappaB cascade / host cell cytoplasm / symbiont-mediated suppression of host type I interferon-mediated signaling pathway / ribonucleoprotein complex / RNA binding Similarity search - Function | |||||||||
| Biological species | HUMAN RESPIRATORY SYNCYTIAL VIRUS![]() | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.6 Å | |||||||||
Authors | El Omari, K. / Dhaliwal, B. / Ren, J. / Abrescia, N.G.A. / Lockyer, M. / Powell, K.L. / Hawkins, A.R. / Stammers, D.K. | |||||||||
Citation | Journal: Acta Crystallogr.,Sect.F / Year: 2011Title: Structures of Respiratory Syncytial Virus Nucleocapsid Protein from Two Crystal Forms: Details of Potential Packing Interactions in the Native Helical Form. Authors: El Omari, K. / Dhaliwal, B. / Ren, J. / Abrescia, N.G.A. / Lockyer, M. / Powell, K.L. / Hawkins, A.R. / Stammers, D.K. | |||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 4v5v.cif.gz | 2.8 MB | Display | PDBx/mmCIF format |
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| PDB format | pdb4v5v.ent.gz | Display | PDB format | |
| PDBx/mmJSON format | 4v5v.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/v5/4v5v ftp://data.pdbj.org/pub/pdb/validation_reports/v5/4v5v | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 2yhmC ![]() 2wj8S S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| 4 | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Component-ID: 1 / Ens-ID: 1 / Beg auth comp-ID: MET / Beg label comp-ID: MET / End auth comp-ID: LEU / End label comp-ID: LEU / Refine code: 1 / Auth seq-ID: 1 - 375 / Label seq-ID: 1 - 375
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HUMAN RESPIRATORY SYNCYTIAL VIRUS
X-RAY DIFFRACTION
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