登録情報 データベース : PDB / ID : 4qeo 構造の表示 ダウンロードとリンクタイトル crystal structure of KRYPTONITE in complex with mCHH DNA, H3(1-15) peptide and SAH 要素DNA 5'-ACTGATGAGTACCAT-3' DNA 5'-GGTACT(5CM)ATCAGTAT-3' Histone H3 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 詳細キーワード transcription/DNA / SRA / SET / histone methylation / methylated DNA / methylation / transcription-DNA complex機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
methyl-CpNpG binding / methyl-CpNpN binding / peptidyl-lysine methylation / [histone H3]-lysine9 N-methyltransferase / histone H3K9 methyltransferase activity / histone H3K9me2 methyltransferase activity / double-stranded methylated DNA binding / methyl-CpG binding / chromosome, centromeric region / 転移酵素; 一炭素原子の基を移すもの; メチル基を移すもの ... methyl-CpNpG binding / methyl-CpNpN binding / peptidyl-lysine methylation / [histone H3]-lysine9 N-methyltransferase / histone H3K9 methyltransferase activity / histone H3K9me2 methyltransferase activity / double-stranded methylated DNA binding / methyl-CpG binding / chromosome, centromeric region / 転移酵素; 一炭素原子の基を移すもの; メチル基を移すもの / structural constituent of chromatin / nucleosome / protein heterodimerization activity / DNA binding / zinc ion binding / nucleoplasm / nucleus 類似検索 - 分子機能 Histone H3-K9 methyltransferase, plant / Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. / SRA-YDG / SRA-YDG superfamily / SAD/SRA domain / YDG domain profile. / SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. / Pre-SET domain / Pre-SET motif / Pre-SET domain profile. ... Histone H3-K9 methyltransferase, plant / Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. / SRA-YDG / SRA-YDG superfamily / SAD/SRA domain / YDG domain profile. / SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. / Pre-SET domain / Pre-SET motif / Pre-SET domain profile. / N-terminal to some SET domains / Beta-clip-like / SET domain / Post-SET domain / Post-SET domain profile. / PUA-like superfamily / SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain / SET domain superfamily / SET domain / SET domain profile. / SET domain / Beta Complex / Histone H3 signature 1. / Histone H3 signature 2. / Histone H3 / Histone H3/CENP-A / Histone H2A/H2B/H3 / Core histone H2A/H2B/H3/H4 / Histone-fold / Mainly Beta 類似検索 - ドメイン・相同性 S-ADENOSYL-L-HOMOCYSTEINE / DNA / DNA (> 10) / Histone H3.2 / Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 / Histone H3 類似検索 - 構成要素生物種 Arabidopsis thaliana (シロイヌナズナ)Synthetic construct (人工物) Xenopus laevis (アフリカツメガエル)手法 X線回折 / シンクロトロン / 分子置換 / 解像度 : 2 Å 詳細データ登録者 Du, J. / Li, S. / Patel, D.J. 引用ジャーナル : Mol.Cell / 年 : 2014タイトル : Mechanism of DNA Methylation-Directed Histone Methylation by KRYPTONITE.著者 : Du, J. / Johnson, L.M. / Groth, M. / Feng, S. / Hale, C.J. / Li, S. / Vashisht, A.A. / Gallego-Bartolome, J. / Wohlschlegel, J.A. / Patel, D.J. / Jacobsen, S.E. 履歴 登録 2014年5月17日 登録サイト : RCSB / 処理サイト : RCSB改定 1.0 2014年7月30日 Provider : repository / タイプ : Initial release改定 1.1 2014年8月20日 Group : Database references改定 1.2 2023年9月20日 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description カテゴリ : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_ref_seq_dif / struct_site Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id 改定 1.3 2024年3月13日 Group : Source and taxonomy / カテゴリ : pdbx_entity_src_syn
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