- PDB-3u5z: Structure of T4 Bacteriophage clamp loader bound to the T4 clamp,... -
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Basic information
Entry
Database: PDB / ID: 3u5z
Title
Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog
Components
(DNA polymerase accessory protein ...) x 2
DNA polymerase processivity component
Primer DNA strand
Template DNA strand
Keywords
DNA BINDING PROTEIN/DNA / AAA+ / ATP hydrolase / clamp loader / sliding clamp / DNA BINDING PROTEIN-DNA complex
Function / homology
Function and homology information
Rad17 RFC-like complex / DNA clamp loader activity / DNA replication factor C complex / Elg1 RFC-like complex / bidirectional double-stranded viral DNA replication / viral DNA genome replication / DNA polymerase processivity factor activity / viral transcription / Hydrolases; Acting on acid anhydrides; Acting on acid anhydrides to facilitate cellular and subcellular movement / DNA-templated DNA replication ...Rad17 RFC-like complex / DNA clamp loader activity / DNA replication factor C complex / Elg1 RFC-like complex / bidirectional double-stranded viral DNA replication / viral DNA genome replication / DNA polymerase processivity factor activity / viral transcription / Hydrolases; Acting on acid anhydrides; Acting on acid anhydrides to facilitate cellular and subcellular movement / DNA-templated DNA replication / DNA replication / DNA repair / ATP hydrolysis activity / DNA binding / ATP binding Similarity search - Function
Bacteriophage clamp loader A subunit, A domain / Bacteriophage clamp loader A subunit, A' domain / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #1260 / Sliding-clamp-loader small subunit gp62 / Sliding-clamp-loader large subunit / : / : / Bacteriophage clamp loader A subunit / Sliding-clamp-loader large subunit, AAA+ ATPase lid domain / Sliding-clamp-loader large subunit, C-terminal domain ...Bacteriophage clamp loader A subunit, A domain / Bacteriophage clamp loader A subunit, A' domain / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #1260 / Sliding-clamp-loader small subunit gp62 / Sliding-clamp-loader large subunit / : / : / Bacteriophage clamp loader A subunit / Sliding-clamp-loader large subunit, AAA+ ATPase lid domain / Sliding-clamp-loader large subunit, C-terminal domain / Sliding clamp, C-terminal / Sliding clamp / gp45 sliding clamp, C terminal / DNA polymerase processivity factor / DNA polymerase processivity factor / Zinc Finger, Delta Prime; domain 3 - #10 / Zinc Finger, Delta Prime; domain 3 / Box / Proliferating Cell Nuclear Antigen / Proliferating Cell Nuclear Antigen - #10 / : / Helicase, Ruva Protein; domain 3 - #60 / : / Single alpha-helices involved in coiled-coils or other helix-helix interfaces / Helicase, Ruva Protein; domain 3 / Helix non-globular / ATPase family associated with various cellular activities (AAA) / ATPase, AAA-type, core / Special / P-loop containing nucleotide triphosphate hydrolases / ATPases associated with a variety of cellular activities / AAA+ ATPase domain / Up-down Bundle / Rossmann fold / P-loop containing nucleoside triphosphate hydrolase / Orthogonal Bundle / 3-Layer(aba) Sandwich / Mainly Alpha / Alpha Beta Similarity search - Domain/homology
Chem-08T / ADENOSINE-5'-DIPHOSPHATE / DNA / DNA (> 10) / Sliding clamp / Sliding-clamp-loader large subunit / Sliding-clamp-loader small subunit Similarity search - Component
B: DNA polymerase accessory protein 44 C: DNA polymerase accessory protein 44 D: DNA polymerase accessory protein 44 E: DNA polymerase accessory protein 44 A: DNA polymerase accessory protein 62 G: DNA polymerase processivity component H: DNA polymerase processivity component F: DNA polymerase processivity component I: Template DNA strand J: Primer DNA strand L: DNA polymerase accessory protein 44 M: DNA polymerase accessory protein 44 N: DNA polymerase accessory protein 44 O: DNA polymerase accessory protein 44 K: DNA polymerase accessory protein 62 Q: DNA polymerase processivity component R: DNA polymerase processivity component P: DNA polymerase processivity component S: Template DNA strand T: Primer DNA strand hetero molecules
B: DNA polymerase accessory protein 44 C: DNA polymerase accessory protein 44 D: DNA polymerase accessory protein 44 E: DNA polymerase accessory protein 44 A: DNA polymerase accessory protein 62 G: DNA polymerase processivity component H: DNA polymerase processivity component F: DNA polymerase processivity component I: Template DNA strand J: Primer DNA strand hetero molecules
L: DNA polymerase accessory protein 44 M: DNA polymerase accessory protein 44 N: DNA polymerase accessory protein 44 O: DNA polymerase accessory protein 44 K: DNA polymerase accessory protein 62 Q: DNA polymerase processivity component R: DNA polymerase processivity component P: DNA polymerase processivity component S: Template DNA strand T: Primer DNA strand hetero molecules