Entry Database : PDB / ID : 3qb4 Structure visualization Downloads & linksTitle Crystal structure of a TGF-beta ligand-receptor complex ComponentsBone morphogenetic protein receptor type-1A Growth/differentiation factor 5 DetailsKeywords CYTOKINE/TRANSFERASE RECEPTOR / CYSTINE-KNOT / Ligand-receptor complex / Protein / Membrane/Extracellular / CYTOKINE-TRANSFERASE RECEPTOR complexFunction / homology Function and homology informationFunction Domain/homology Component
neural plate mediolateral regionalization / paraxial mesoderm structural organization / positive regulation of cardiac ventricle development / fibrous ring of heart morphogenesis / positive regulation of transforming growth factor beta2 production / Mullerian duct regression / ossification involved in bone remodeling / heart formation / atrioventricular node cell development / mesendoderm development ... neural plate mediolateral regionalization / paraxial mesoderm structural organization / positive regulation of cardiac ventricle development / fibrous ring of heart morphogenesis / positive regulation of transforming growth factor beta2 production / Mullerian duct regression / ossification involved in bone remodeling / heart formation / atrioventricular node cell development / mesendoderm development / tricuspid valve morphogenesis / atrioventricular valve development / forelimb morphogenesis / dorsal aorta morphogenesis / central nervous system neuron differentiation / cardiac right ventricle morphogenesis / pharyngeal arch artery morphogenesis / BMP binding / chondroblast differentiation / regulation of cardiac muscle cell proliferation / hindlimb morphogenesis / negative regulation of muscle cell differentiation / negative regulation of smooth muscle cell migration / negative regulation of mesenchymal cell apoptotic process / lateral mesoderm development / regulation of lateral mesodermal cell fate specification / ventricular compact myocardium morphogenesis / pituitary gland development / mitral valve morphogenesis / positive regulation of chondrocyte differentiation / mesenchymal cell apoptotic process / BMP receptor activity / dorsal/ventral axis specification / regulation of cellular senescence / neural crest cell development / transforming growth factor beta receptor activity, type I / ectoderm development / cardiac conduction system development / endocardial cushion formation / receptor protein serine/threonine kinase / transmembrane receptor protein serine/threonine kinase activity / Signaling by BMP / cellular response to BMP stimulus / outflow tract septum morphogenesis / ventricular trabecula myocardium morphogenesis / positive regulation of BMP signaling pathway / dorsal/ventral pattern formation / negative regulation of chondrocyte differentiation / embryonic limb morphogenesis / Molecules associated with elastic fibres / positive regulation of mesenchymal cell proliferation / endocardial cushion morphogenesis / embryonic digit morphogenesis / ventricular septum morphogenesis / roof of mouth development / outflow tract morphogenesis / SMAD binding / odontogenesis of dentin-containing tooth / somatic stem cell population maintenance / positive regulation of SMAD protein signal transduction / mesoderm formation / regulation of multicellular organism growth / developmental growth / embryonic organ development / chondrocyte differentiation / BMP signaling pathway / positive regulation of bone mineralization / positive regulation of osteoblast differentiation / somitogenesis / response to mechanical stimulus / positive regulation of cardiac muscle cell proliferation / positive regulation of vascular associated smooth muscle cell proliferation / positive regulation of neuron differentiation / transforming growth factor beta receptor signaling pathway / epithelial cell proliferation / cytokine activity / positive regulation of epithelial cell proliferation / growth factor activity / lung development / HFE-transferrin receptor complex / cellular response to growth factor stimulus / positive regulation of miRNA transcription / negative regulation of neurogenesis / osteoblast differentiation / negative regulation of epithelial cell proliferation / cell-cell signaling / angiogenesis / in utero embryonic development / negative regulation of neuron apoptotic process / receptor complex / immune response / phosphorylation / external side of plasma membrane / negative regulation of gene expression / protein serine/threonine kinase activity / neuronal cell body / dendrite / positive regulation of gene expression / protein homodimerization activity / positive regulation of transcription by RNA polymerase II Similarity search - Function TGF-beta, propeptide / TGF-beta propeptide / Transforming growth factor beta, conserved site / TGF-beta family signature. / Transforming growth factor-beta-related / GS domain / Transforming growth factor beta type I GS-motif / GS domain profile. / GS motif / Transforming growth factor-beta (TGF-beta) family ... TGF-beta, propeptide / TGF-beta propeptide / Transforming growth factor beta, conserved site / TGF-beta family signature. / Transforming growth factor-beta-related / GS domain / Transforming growth factor beta type I GS-motif / GS domain profile. / GS motif / Transforming growth factor-beta (TGF-beta) family / Activin types I and II receptor domain / Activin types I and II receptor domain / Transforming growth factor-beta, C-terminal / Transforming growth factor beta like domain / TGF-beta family profile. / Cystine Knot Cytokines, subunit B / Cystine-knot cytokines / CD59 / CD59 / Ser/Thr protein kinase, TGFB receptor / Snake toxin-like superfamily / Cystine-knot cytokine / Ribbon / Serine/threonine-protein kinase, active site / Serine/Threonine protein kinases active-site signature. / Protein kinase domain / Serine/Threonine protein kinases, catalytic domain / Protein kinase, ATP binding site / Protein kinases ATP-binding region signature. / Protein kinase domain profile. / Protein kinase domain / Protein kinase-like domain superfamily / Mainly Beta Similarity search - Domain/homologyBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution : 2.28 Å DetailsAuthors Mueller, T.D. / Nickel, J. / Sebald, W. CitationJournal : Bmc Biol. / Year : 2015Title : GDF-5 can act as a context-dependent BMP-2 antagonist.Authors : Klammert, U. / Mueller, T.D. / Hellmann, T.V. / Wuerzler, K.K. / Kotzsch, A. / Schliermann, A. / Schmitz, W. / Kuebler, A.C. / Sebald, W. / Nickel, J. History Deposition Jan 12, 2011 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Mar 14, 2012 Provider : repository / Type : Initial releaseRevision 1.1 Oct 7, 2015 Group : Database referencesRevision 1.2 Sep 13, 2023 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details
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