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Open data
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Basic information
Entry | Database: PDB / ID: 3jrq | ||||||||||||||||||
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Title | Crystal structure of (+)-ABA-bound PYL1 in complex with ABI1 | ||||||||||||||||||
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![]() | HYDROLASE/Hormone Receptor / Plant Hormone Receptor / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | ||||||||||||||||||
Function / homology | PPM-type phosphatase, divalent cation binding / PPM-type phosphatase domain / Protein phosphatase 2C family / Polyketide cyclase/dehydrase / PPM-type phosphatase domain profile. / PPM-type phosphatase domain signature. / Polyketide cyclase / dehydrase and lipid transport / Protein phosphatase 2C / START-like domain superfamily / PPM-type phosphatase domain superfamily ...PPM-type phosphatase, divalent cation binding / PPM-type phosphatase domain / Protein phosphatase 2C family / Polyketide cyclase/dehydrase / PPM-type phosphatase domain profile. / PPM-type phosphatase domain signature. / Polyketide cyclase / dehydrase and lipid transport / Protein phosphatase 2C / START-like domain superfamily / PPM-type phosphatase domain superfamily / regulation of abscisic acid-activated signaling pathway / negative regulation of abscisic acid-activated signaling pathway / regulation of stomatal movement / response to abscisic acid / magnesium-dependent protein serine/threonine phosphatase activity / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() | ||||||||||||||||||
Specimen source | ![]() ![]() ![]() | ||||||||||||||||||
Method | ![]() ![]() ![]() | ||||||||||||||||||
![]() | Miyazono, K. / Miyakawa, T. / Sawano, Y. / Kubota, K. / Tanokura, M. | ||||||||||||||||||
![]() | Journal: Nature / Year: 2009 Title: Structural basis of abscisic acid signalling ![]() | ||||||||||||||||||
Validation Report | ![]() ![]() ![]() | ||||||||||||||||||
Date | Deposition: Sep 8, 2009 / Release: Nov 3, 2009
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmcif format | ![]() ![]() |
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PDB format | ![]() ![]() |
PDBML Plus | ![]() |
Others | ![]() |
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Links
-Related structure data
Related structure data | ![]() SC3jrs ![]() S1a6q S: Starting model for refinement C: citing same article |
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Similar-shape strucutres |
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell | γ α β
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Components
#1: Protein/peptide | Mass: 35875.992 Da / Num. of mol.: 1 / Fragment: UNP residues 125-429 / Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() ![]() References: UniProt: P49597, protein-serine/threonine phosphatase |
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#2: Protein/peptide | Mass: 21446.926 Da / Num. of mol.: 1 / Fragment: UNP residues 28-210 / Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() |
#3: Chemical | ChemComp-A8S / ( |
#4: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.13 / Density percent sol: 42.28 % |
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Crystal grow![]() | Temp: 293 K / Method: vapor diffusion, sitting drop / pH: 5 Details: 21% PEG3000, 0.1 M sodium citrate pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
-Data collection
Diffraction | Mean temperature: 95 kelvins | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Source | Source: ![]() ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Detector | Type: ADSC QUANTUM 210r / Detector: CCD | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Radiation | Diffraction protocol: SINGLE WAVELENGTH / Monochromatic or laue m l: M / Scattering type: x-ray | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Radiation wavelength | Wavelength![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reflection | B iso Wilson estimate: 45.868 Å2 / D resolution high: 2.1 Å / D resolution low: 20 Å / Number obs: 26472 / Observed criterion sigma I: -3 / Rmerge I obs: 0.093 / NetI over sigmaI: 10.88 / Percent possible obs: 93.3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reflection shell | Diffraction ID: 1
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