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Yorodumi- PDB-3g5n: Triple ligand occupancy crystal structure of cytochrome P450 2B4 ... -
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-Basic information
Entry | Database: PDB / ID: 3g5n | ||||||
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Title | Triple ligand occupancy crystal structure of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole | ||||||
Components | Cytochrome P450 2B4 | ||||||
Keywords | OXIDOREDUCTASE / P450 / cytochrome P450 2B4 / monooxygenase / membrane protein / CYP 2B4 / CYP LM2 / Endoplasmic reticulum / Heme / Iron / Membrane / Metal-binding / Microsome / Phosphoprotein / Polymorphism | ||||||
Function / homology | Function and homology information arachidonate epoxygenase activity / epoxygenase P450 pathway / unspecific monooxygenase / aromatase activity / xenobiotic metabolic process / iron ion binding / heme binding / endoplasmic reticulum membrane Similarity search - Function | ||||||
Biological species | Oryctolagus cuniculus (rabbit) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.5 Å | ||||||
Authors | Gay, S.C. / Sun, L. / Maekawa, K. / Halpert, J.R. / Stout, C.D. | ||||||
Citation | Journal: Biochemistry / Year: 2009 Title: Crystal structures of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole: ligand-induced structural response through alpha-helical repositioning. Authors: Gay, S.C. / Sun, L. / Maekawa, K. / Halpert, J.R. / Stout, C.D. #1: Journal: Biochemistry / Year: 2007 Title: Structural and thermodynamic consequences of 1-(4-chlorophenyl)imidazole binding to cytochrome P450 2B4. Authors: Zhao, Y. / Sun, L. / Muralidhara, B.K. / Kumar, S. / White, M.A. / Stout, C.D. / Halpert, J.R. #2: Journal: J.Biol.Chem. / Year: 2004 Title: Structure of mammalian cytochrome P450 2B4 complexed with 4-(4-chlorophenyl)imidazole at 1.9 {angstrom} resolution: Insight into the range of P450 conformations and coordination of redox partner binding. Authors: Scott, E.E. / White, M.A. / He, Y.A. / Johnson, E.F. / Stout, C.D. / Halpert, J.R. #3: Journal: J.Biol.Chem. / Year: 2006 Title: Structure of microsomal cytochrome P450 2B4 complexed with the antifungal drug bifonazole: insight into P450 conformational plasticity and membrane interaction. Authors: Zhao, Y. / White, M.A. / Muralidhara, B.K. / Sun, L. / Halpert, J.R. / Stout, C.D. #4: Journal: Proc.Natl.Acad.Sci.USA / Year: 2003 Title: An open conformation of mammalian cytochrome P450 2B4 at 1.6 A resolution. Authors: Scott, E.E. / He, Y.A. / Wester, M.R. / White, M.A. / Chin, C.C. / Halpert, J.R. / Johnson, E.F. / Stout, C.D. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 3g5n.cif.gz | 378.9 KB | Display | PDBx/mmCIF format |
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PDB format | pdb3g5n.ent.gz | 306.2 KB | Display | PDB format |
PDBx/mmJSON format | 3g5n.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 3g5n_validation.pdf.gz | 3 MB | Display | wwPDB validaton report |
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Full document | 3g5n_full_validation.pdf.gz | 3.1 MB | Display | |
Data in XML | 3g5n_validation.xml.gz | 77.5 KB | Display | |
Data in CIF | 3g5n_validation.cif.gz | 101 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/g5/3g5n ftp://data.pdbj.org/pub/pdb/validation_reports/g5/3g5n | HTTPS FTP |
-Related structure data
Related structure data | 3g93C 1po5S 1suoS 2bdmS 2q6nS S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
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-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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