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Yorodumi- PDB-3cos: Crystal structure of human class II alcohol dehydrogenase (ADH4) ... -
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Basic information
| Entry | Database: PDB / ID: 3cos | ||||||
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| Title | Crystal structure of human class II alcohol dehydrogenase (ADH4) in complex with NAD and Zn | ||||||
Components | Alcohol dehydrogenase 4 | ||||||
Keywords | OXIDOREDUCTASE / medium chain dehydrogenase / alcohol dehydrogenase / Zinc-dependent / Metal-binding / NAD / Structural Genomics / Structural Genomics Consortium / SGC | ||||||
| Function / homology | Function and homology informationalcohol catabolic process / quinone metabolic process / ethanol metabolic process / all-trans-retinol dehydrogenase (NAD+) / all-trans retinal binding / fatty acid omega-oxidation / S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity / quinone reductase (NADPH) activity / benzaldehyde dehydrogenase (NAD+) activity / alcohol metabolic process ...alcohol catabolic process / quinone metabolic process / ethanol metabolic process / all-trans-retinol dehydrogenase (NAD+) / all-trans retinal binding / fatty acid omega-oxidation / S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity / quinone reductase (NADPH) activity / benzaldehyde dehydrogenase (NAD+) activity / alcohol metabolic process / formaldehyde catabolic process / aldehyde metabolic process / Ethanol oxidation / RA biosynthesis pathway / alcohol dehydrogenase (NAD+) activity / all-trans-retinol dehydrogenase (NAD+) activity / aldose reductase (NADPH) activity / retinol metabolic process / retinol binding / retinoid metabolic process / NAD binding / zinc ion binding / nucleoplasm / cytosol Similarity search - Function | ||||||
| Biological species | Homo sapiens (human) | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.1 Å | ||||||
Authors | Kavanagh, K.L. / Shafqat, N. / Yue, W. / von Delft, F. / Bishop, S. / Roos, A. / Murray, J. / Edwards, A.M. / Arrowsmith, C.H. / Bountra, C. ...Kavanagh, K.L. / Shafqat, N. / Yue, W. / von Delft, F. / Bishop, S. / Roos, A. / Murray, J. / Edwards, A.M. / Arrowsmith, C.H. / Bountra, C. / Oppermann, U. / Structural Genomics Consortium (SGC) | ||||||
Citation | Journal: To be PublishedTitle: Crystal structure of human class II alcohol dehydrogenase (ADH4) in complex with NAD and Zn. Authors: Kavanagh, K.L. / Shafqat, N. / Yue, W. / von Delft, F. / Bishop, S. / Roos, A. / Murray, J. / Edwards, A.M. / Arrowsmith, C.H. / Bountra, C. / Oppermann, U. | ||||||
| History |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 3cos.cif.gz | 309.3 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb3cos.ent.gz | 248.4 KB | Display | PDB format |
| PDBx/mmJSON format | 3cos.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 3cos_validation.pdf.gz | 1.6 MB | Display | wwPDB validaton report |
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| Full document | 3cos_full_validation.pdf.gz | 1.6 MB | Display | |
| Data in XML | 3cos_validation.xml.gz | 58.9 KB | Display | |
| Data in CIF | 3cos_validation.cif.gz | 84.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/co/3cos ftp://data.pdbj.org/pub/pdb/validation_reports/co/3cos | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 1ee2S S: Starting model for refinement |
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| Similar structure data |
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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Homo sapiens (human)
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