Capsid protein VP1,Polyomavirus / Polyomavirus Vp1; Chain A / Capsid protein VP1,Polyomavirus / Polyomavirus capsid protein VP1 superfamily / Polyomavirus coat protein / Double-stranded DNA virus, group I, capsid / サンドイッチ / Mainly Beta 類似検索 - ドメイン・相同性
AUTHORS STATE THAT ALTHOUGH MODELED AS BETA, O1 OF GLC302 EXHIBITS INTERCHANGING ALPHA AND BETA ...AUTHORS STATE THAT ALTHOUGH MODELED AS BETA, O1 OF GLC302 EXHIBITS INTERCHANGING ALPHA AND BETA CONFORMATIONS IN SOLUTION
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実験情報
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実験
実験
手法: X線回折 / 使用した結晶の数: 1
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試料調製
結晶
マシュー密度: 2.74 Å3/Da / 溶媒含有率: 55.08 %
結晶化
温度: 293 K / 手法: 蒸気拡散法, ハンギングドロップ法 詳細: RESERVOIR: 0.1 M TRIS, PH 8.5, 24% PEG3350. DROP: RESERVOIR MIXED 4:1 WITH 30% ETHYLENE GLYCOL. THIS WAS MIXED 1:1 WITH VP1 (11 MG/ML), VAPOR DIFFUSION, HANGING DROP, temperature 293K
解像度: 2.25→29.76 Å / Cor.coef. Fo:Fc: 0.947 / Cor.coef. Fo:Fc free: 0.922 / SU B: 5.883 / SU ML: 0.148 / 交差検証法: THROUGHOUT / ESU R: 0.376 / ESU R Free: 0.241 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD 詳細: some of the residues from Gly30 to Asp42 were disordered in several chains and were not modeled. The side chain of Asp42 of chain E was modeled as Ala due to missing density.
Rfactor
反射数
%反射
Selection details
Rfree
0.23318
6868
10 %
RANDOM
Rwork
0.18743
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obs
0.19206
68387
89.8 %
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.4 Å / 溶媒モデル: MASK