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Yorodumi- PDB-3bgf: X-ray crystal structure of the SARS coronavirus spike receptor bi... -
+Open data
-Basic information
Entry | Database: PDB / ID: 3bgf | ||||||
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Title | X-ray crystal structure of the SARS coronavirus spike receptor binding domain in complex with F26G19 Fab | ||||||
Components |
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Keywords | Viral Protein/Immune System / antigen-antibody complex / Envelope protein / Glycoprotein / Host-virus interaction / Membrane / Transmembrane / Virion / Virulence / Viral Protein-Immune System COMPLEX | ||||||
Function / homology | Function and homology information Maturation of spike protein / Translation of Structural Proteins / Virion Assembly and Release / Attachment and Entry / endocytosis involved in viral entry into host cell / SARS-CoV-1 activates/modulates innate immune responses / suppression by virus of host tetherin activity / host cell endoplasmic reticulum-Golgi intermediate compartment membrane / membrane fusion / positive regulation of viral entry into host cell ...Maturation of spike protein / Translation of Structural Proteins / Virion Assembly and Release / Attachment and Entry / endocytosis involved in viral entry into host cell / SARS-CoV-1 activates/modulates innate immune responses / suppression by virus of host tetherin activity / host cell endoplasmic reticulum-Golgi intermediate compartment membrane / membrane fusion / positive regulation of viral entry into host cell / receptor-mediated virion attachment to host cell / host cell surface receptor binding / fusion of virus membrane with host plasma membrane / fusion of virus membrane with host endosome membrane / viral envelope / symbiont-mediated suppression of host type I interferon-mediated signaling pathway / host cell plasma membrane / virion membrane / membrane / identical protein binding Similarity search - Function | ||||||
Biological species | SARS coronavirus Mus musculus (house mouse) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 3 Å | ||||||
Authors | Pak, J.E. / Rini, J.M. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 2009 Title: Structural insights into immune recognition of the severe acute respiratory syndrome coronavirus S protein receptor binding domain. Authors: Pak, J.E. / Sharon, C. / Satkunarajah, M. / Auperin, T.C. / Cameron, C.M. / Kelvin, D.J. / Seetharaman, J. / Cochrane, A. / Plummer, F.A. / Berry, J.D. / Rini, J.M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 3bgf.cif.gz | 234.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb3bgf.ent.gz | 195 KB | Display | PDB format |
PDBx/mmJSON format | 3bgf.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/bg/3bgf ftp://data.pdbj.org/pub/pdb/validation_reports/bg/3bgf | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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