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Yorodumi- PDB-7dpm: Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab -
+Open data
-Basic information
Entry | Database: PDB / ID: 7dpm | ||||||
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Title | Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab | ||||||
Components |
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Keywords | IMMUNE SYSTEM/VIRAL PROTEIN / SARS-CoV-2 / Spike / RBD / Antibody / ADE / VIRUS / IMMUNE SYSTEM / IMMUNE SYSTEM-VIRAL PROTEIN complex | ||||||
Function / homology | Function and homology information Maturation of spike protein / viral translation / Translation of Structural Proteins / Virion Assembly and Release / host cell surface / host extracellular space / suppression by virus of host tetherin activity / Induction of Cell-Cell Fusion / structural constituent of virion / host cell endoplasmic reticulum-Golgi intermediate compartment membrane ...Maturation of spike protein / viral translation / Translation of Structural Proteins / Virion Assembly and Release / host cell surface / host extracellular space / suppression by virus of host tetherin activity / Induction of Cell-Cell Fusion / structural constituent of virion / host cell endoplasmic reticulum-Golgi intermediate compartment membrane / entry receptor-mediated virion attachment to host cell / receptor-mediated endocytosis of virus by host cell / Attachment and Entry / membrane fusion / positive regulation of viral entry into host cell / receptor-mediated virion attachment to host cell / receptor ligand activity / host cell surface receptor binding / fusion of virus membrane with host plasma membrane / fusion of virus membrane with host endosome membrane / viral envelope / symbiont-mediated suppression of host type I interferon-mediated signaling pathway / virion attachment to host cell / SARS-CoV-2 activates/modulates innate and adaptive immune responses / host cell plasma membrane / virion membrane / membrane / identical protein binding / plasma membrane Similarity search - Function | ||||||
Biological species | Homo sapiens (human) Severe acute respiratory syndrome coronavirus 2 | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.304 Å | ||||||
Authors | Wang, J. / Jiao, S. / Wang, R. / Zhang, J. / Zhang, M. / Wang, M. | ||||||
Citation | Journal: Mabs / Year: 2021 Title: Characterization of MW06, a human monoclonal antibody with cross-neutralization activity against both SARS-CoV-2 and SARS-CoV. Authors: Jiang, W. / Wang, J. / Jiao, S. / Gu, C. / Xu, W. / Chen, B. / Wang, R. / Chen, H. / Xie, Y. / Wang, A. / Li, G. / Zeng, D. / Zhang, J. / Zhang, M. / Wang, S. / Wang, M. / Gui, X. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7dpm.cif.gz | 483.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7dpm.ent.gz | 395.4 KB | Display | PDB format |
PDBx/mmJSON format | 7dpm.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/dp/7dpm ftp://data.pdbj.org/pub/pdb/validation_reports/dp/7dpm | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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