登録情報 | データベース: PDB / ID: 2jq8 |
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タイトル | Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris |
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要素 | Vitronectin |
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キーワード | CELL ADHESION / somatomedin B domain / vitronectin / disulfide-rich domain / PAI-1 / uPAR |
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機能・相同性 | 機能・相同性情報
smooth muscle cell-matrix adhesion / rough endoplasmic reticulum lumen / peptidase inhibitor complex / alphav-beta3 integrin-vitronectin complex / scavenger receptor activity / negative regulation of endopeptidase activity / protein complex involved in cell-matrix adhesion / negative regulation of blood coagulation / extracellular matrix binding / positive regulation of vascular endothelial growth factor receptor signaling pathway ...smooth muscle cell-matrix adhesion / rough endoplasmic reticulum lumen / peptidase inhibitor complex / alphav-beta3 integrin-vitronectin complex / scavenger receptor activity / negative regulation of endopeptidase activity / protein complex involved in cell-matrix adhesion / negative regulation of blood coagulation / extracellular matrix binding / positive regulation of vascular endothelial growth factor receptor signaling pathway / positive regulation of cell-substrate adhesion / Molecules associated with elastic fibres / extracellular matrix structural constituent / cell adhesion mediated by integrin / polysaccharide binding / Syndecan interactions / positive regulation of wound healing / positive regulation of smooth muscle cell migration / endodermal cell differentiation / oligodendrocyte differentiation / basement membrane / protein polymerization / ECM proteoglycans / Integrin cell surface interactions / negative regulation of fibrinolysis / regulation of cell adhesion / collagen binding / extracellular matrix organization / cell-matrix adhesion / Regulation of Complement cascade / liver regeneration / positive regulation of receptor-mediated endocytosis / Golgi lumen / positive regulation of peptidyl-tyrosine phosphorylation / cell migration / integrin binding / positive regulation of protein binding / heparin binding / collagen-containing extracellular matrix / blood microparticle / cell adhesion / immune response / intracellular membrane-bounded organelle / endoplasmic reticulum / extracellular space / extracellular exosome / extracellular region / identical protein binding類似検索 - 分子機能 Somatomedin B domain, chordata / Somatomedin B -like domains / Somatomedin B domain / Somatomedin B-like domain superfamily / Somatomedin B domain / Somatomedin B domain (SMB) signature. / Somatomedin B (SMB) domain profile. / Hemopexin, conserved site / Hemopexin domain signature. / Hemopexin-like domain ...Somatomedin B domain, chordata / Somatomedin B -like domains / Somatomedin B domain / Somatomedin B-like domain superfamily / Somatomedin B domain / Somatomedin B domain (SMB) signature. / Somatomedin B (SMB) domain profile. / Hemopexin, conserved site / Hemopexin domain signature. / Hemopexin-like domain / Hemopexin-like repeats / Hemopexin-like domain superfamily / Hemopexin / Hemopexin repeat profile. / Hemopexin-like repeats.類似検索 - ドメイン・相同性 |
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生物種 | Homo sapiens (ヒト) |
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手法 | 溶液NMR / molecular dynamics |
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データ登録者 | Gaardsvoll, H. / Hirschberg, D. / Nielbo, S. / Mayasundari, A. / Peterson, C.B. / Jansson, A. / Jorgensen, T.J.D. / Poulsen, F.M. |
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引用 | ジャーナル: Protein Sci. / 年: 2007 タイトル: Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris 著者: Kjaergaard, M. / Gardsvoll, H. / Hirschberg, D. / Nielbo, S. / Mayasundari, A. / Peterson, C.B. / Jansson, A. / Jorgensen, T.J.D. / Poulsen, F.M. / Ploug, M. |
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履歴 | 登録 | 2007年5月30日 | 登録サイト: RCSB / 処理サイト: RCSB |
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改定 1.0 | 2007年9月11日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2011年7月13日 | Group: Version format compliance |
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改定 1.2 | 2022年3月9日 | Group: Data collection / Database references / Derived calculations カテゴリ: database_2 / pdbx_nmr_software ...database_2 / pdbx_nmr_software / pdbx_struct_assembly / pdbx_struct_oper_list / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_nmr_software.name / _struct_ref_seq_dif.details |
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改定 1.3 | 2023年12月20日 | Group: Data collection / Other カテゴリ: chem_comp_atom / chem_comp_bond / pdbx_database_status Item: _pdbx_database_status.deposit_site |
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