ascospore-type prospore membrane formation / Golgi to plasma membrane transport vesicle / Anchoring of the basal body to the plasma membrane / RAB GEFs exchange GTP for GDP on RABs / cell tip / cellular bud tip / cellular bud neck / mating projection tip / phosphatidylinositol-4-phosphate binding / sporulation resulting in formation of a cellular spore ...ascospore-type prospore membrane formation / Golgi to plasma membrane transport vesicle / Anchoring of the basal body to the plasma membrane / RAB GEFs exchange GTP for GDP on RABs / cell tip / cellular bud tip / cellular bud neck / mating projection tip / phosphatidylinositol-4-phosphate binding / sporulation resulting in formation of a cellular spore / exocytosis / transport vesicle / guanyl-nucleotide exchange factor activity / autophagy / protein transport / identical protein binding / cytosol Similarity search - Function
Resolution: 3→3.11 Å / Redundancy: 5.6 % / Rmerge(I) obs: 0.422 / Mean I/σ(I) obs: 2.2 / Num. unique all: 6357 / Rsym value: 0.422 / % possible all: 98.2
-
Processing
Software
Name
Version
Classification
ADSC
Quantum
datacollection
SHARP
phasing
CNS
1.1
refinement
DENZO
datareduction
SCALEPACK
datascaling
Refinement
Method to determine structure: SAD / Resolution: 3→50 Å / Isotropic thermal model: Isotropic / Cross valid method: THROUGHOUT / σ(F): 0 / σ(I): 0 / Stereochemistry target values: Engh & Huber Details: THIS IS A TWINNED STRUCTURE. THE TWINNING OPERATOR IS (H,K,L) -> (h, -k, -l) AND THE TWINNING FRACTION IS 0.500.
Rfactor
Num. reflection
Selection details
Rfree
0.285
-
RANDOM
Rwork
0.229
-
-
all
-
65695
-
obs
-
65695
-
Displacement parameters
Biso mean: 138.1 Å2
Refine analyze
Luzzati coordinate error obs: 0.39 Å / Luzzati sigma a obs: 0.44 Å
Refinement step
Cycle: LAST / Resolution: 3→50 Å
Protein
Nucleic acid
Ligand
Solvent
Total
Num. atoms
19008
0
0
262
19270
Refine LS restraints
Refine-ID
Type
Dev ideal
X-RAY DIFFRACTION
c_angle_deg
1.2
X-RAY DIFFRACTION
c_bond_d
0.01
X-RAY DIFFRACTION
c_dihedral_angle_d
19
X-RAY DIFFRACTION
c_improper_angle_d
0.61
+
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