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- PDB-1zta: THE SOLUTION STRUCTURE OF A LEUCINE-ZIPPER MOTIF PEPTIDE -

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Basic information

Entry
Database: PDB / ID: 1zta
TitleTHE SOLUTION STRUCTURE OF A LEUCINE-ZIPPER MOTIF PEPTIDE
ComponentsLEUCINE ZIPPER MONOMER
KeywordsDNA-BINDING MOTIF
Function / homology
Function and homology information


FCERI mediated MAPK activation / protein localization to nuclear periphery / Activation of the AP-1 family of transcription factors / response to amino acid starvation / negative regulation of ribosomal protein gene transcription by RNA polymerase II / positive regulation of cellular response to amino acid starvation / mediator complex binding / Oxidative Stress Induced Senescence / TFIID-class transcription factor complex binding / amino acid biosynthetic process ...FCERI mediated MAPK activation / protein localization to nuclear periphery / Activation of the AP-1 family of transcription factors / response to amino acid starvation / negative regulation of ribosomal protein gene transcription by RNA polymerase II / positive regulation of cellular response to amino acid starvation / mediator complex binding / Oxidative Stress Induced Senescence / TFIID-class transcription factor complex binding / amino acid biosynthetic process / positive regulation of RNA polymerase II transcription preinitiation complex assembly / positive regulation of transcription initiation by RNA polymerase II / cellular response to nutrient levels / cellular response to amino acid starvation / RNA polymerase II transcription regulator complex / DNA-binding transcription activator activity, RNA polymerase II-specific / transcription regulator complex / sequence-specific DNA binding / RNA polymerase II-specific DNA-binding transcription factor binding / DNA-binding transcription factor activity, RNA polymerase II-specific / intracellular signal transduction / RNA polymerase II cis-regulatory region sequence-specific DNA binding / DNA-binding transcription factor activity / chromatin binding / negative regulation of transcription by RNA polymerase II / positive regulation of transcription by RNA polymerase II / identical protein binding / nucleus
Similarity search - Function
: / Basic region leucine zipper / Basic-leucine zipper (bZIP) domain signature. / Basic-leucine zipper (bZIP) domain profile. / basic region leucin zipper / Basic-leucine zipper domain / Basic-leucine zipper domain superfamily
Similarity search - Domain/homology
General control transcription factor GCN4
Similarity search - Component
Biological speciesSaccharomyces cerevisiae (brewer's yeast)
MethodSOLUTION NMR
AuthorsSaudek, V. / Pastore, A. / Castiglione Morelli, M.A. / Frank, R. / Gausepohl, H. / Gibson, T.
Citation
Journal: Protein Eng. / Year: 1991
Title: The solution structure of a leucine-zipper motif peptide.
Authors: Saudek, V. / Pastore, A. / Morelli, M.A. / Frank, R. / Gausepohl, H. / Gibson, T.
#1: Journal: Protein Eng. / Year: 1990
Title: Solution Structure of the DNA-Binding Domain of the Yeast Transcriptional Activator Protein GCN4
Authors: Saudek, V. / Pastore, A. / Castiglione Morelli, M.A. / Frank, R. / Gausepohl, H. / Gibson, T. / Weih, F. / Roesch, P.
#2: Journal: Biochemistry / Year: 1991
Title: Solution Structure of the Basic Region from the Transcriptional Activator GCN4
Authors: Pastore, A. / Saudek, V. / Castiglione Morelli, M.A. / Frank, R. / Gausepohl, H. / Gibson, T. / Weih, F. / Roesch, P.
History
DepositionOct 11, 1990Processing site: BNL
Revision 1.0Apr 15, 1993Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Mar 2, 2022Group: Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_oper_list
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: LEUCINE ZIPPER MONOMER


Theoretical massNumber of molelcules
Total (without water)4,2471
Polymers4,2471
Non-polymers00
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)20 / -
Representative

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Components

#1: Protein/peptide LEUCINE ZIPPER MONOMER


Mass: 4246.950 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Saccharomyces cerevisiae (brewer's yeast)
References: UniProt: P03069

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

NMR software
NameDeveloperClassification
DISMANBRAUN,GOrefinement
GROMOSVAN GUNSTEREN,BERENDSENrefinement
NMR ensembleConformers submitted total number: 20

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