+Open data
-Basic information
Entry | Database: PDB / ID: 1vyc | ||||||
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Title | Neurotoxin from Bungarus candidus | ||||||
Components | BUCAIN | ||||||
Keywords | NEUROTOXIN / SNAKE NEUROTOXIN | ||||||
Function / homology | Snake toxin and toxin-like protein / Snake three-finger toxin / Snake toxins signature. / Snake toxin, conserved site / Snake toxin-like superfamily / toxin activity / extracellular region / Bucain Function and homology information | ||||||
Biological species | BUNGARUS CANDIDUS (cobra) | ||||||
Method | SOLUTION NMR / THEORETICAL MODEL / distance geometry | ||||||
Model type details | MINIMIZED AVERAGE | ||||||
Authors | Gopinath, G. | ||||||
Citation | Journal: To be Published Title: Structure of Neurotoxin from Bungarus Candidus Authors: Gopinath, G. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1vyc.cif.gz | 19 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1vyc.ent.gz | 14.7 KB | Display | PDB format |
PDBx/mmJSON format | 1vyc.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1vyc_validation.pdf.gz | 347.3 KB | Display | wwPDB validaton report |
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Full document | 1vyc_full_validation.pdf.gz | 349.5 KB | Display | |
Data in XML | 1vyc_validation.xml.gz | 3.5 KB | Display | |
Data in CIF | 1vyc_validation.cif.gz | 4.2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/vy/1vyc ftp://data.pdbj.org/pub/pdb/validation_reports/vy/1vyc | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 7228.554 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Details: MALAYSIAN KRAIT / Source: (natural) BUNGARUS CANDIDUS (cobra) / References: UniProt: P83346 |
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-Experimental details
-Experiment
Experiment |
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NMR experiment |
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NMR details | Text: MEAN STRUCTURE. THE STRUCTURE WAS DETERMINED USING 2D 1H-NMR |
-Sample preparation
Sample conditions |
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-Data collection
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: distance geometry / Software ordinal: 1 / Details: TORSTEN SCHWEDE, NICOLAS GUEX & MANUEL C. PEITSCH | |||||||||
NMR ensemble | Conformer selection criteria: MINIMIZED AVERAGE STRUCTURE / Conformers calculated total number: 20 / Conformers submitted total number: 1 |