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- PDB-1q8f: Crystal Structure of the E.coli pyrimidine nucleoside hydrolase yeiK -
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Open data
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Basic information
Entry | Database: PDB / ID: 1q8f | ||||||
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Title | Crystal Structure of the E.coli pyrimidine nucleoside hydrolase yeiK | ||||||
![]() | Pyrimidine nucleoside hydrolase | ||||||
![]() | HYDROLASE / open alpha-beta structure / NH-fold | ||||||
Function / homology | ![]() ribosylpyrimidine nucleosidase / pyrimidine ribonucleoside catabolic process / uridine nucleosidase activity / purine nucleosidase activity / pyrimidine nucleobase metabolic process / purine nucleoside catabolic process / protein homotetramerization / calcium ion binding / protein-containing complex / identical protein binding / cytosol Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Giabbai, B. / Degano, M. | ||||||
![]() | ![]() Title: Crystal structure to 1.7 a of the Escherichia coli pyrimidine nucleoside hydrolase YeiK, a novel candidate for cancer gene therapy. Authors: Giabbai, B. / Degano, M. #1: ![]() Title: Three-dimensional structure of the Inosine-Uridine Nucleoside N-ribohydrolase from Crithidia fasciculata Authors: Degano, M. / Gopaul, D.N. / Scapin, G. / Schramm, V.L. / Sacchettini, J.C. #2: ![]() Title: Trypanosomal nucleoside hydrolase. A novel mechanism from the structure with a transition-state inhibitor Authors: Degano, M. / Almo, S.C. / Sacchettini, J.C. / Schramm, V.L. #3: ![]() Title: Structure and function of a novel purine specific nucleoside hydrolase from Trypanosoma vivax Authors: Versees, W. / Decanniere, K. / Pelle, R. / Depoorter, J. / Brosens, E. / Parkin, D.W. / Steyaert, J. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 266.1 KB | Display | ![]() |
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PDB format | ![]() | 211 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 465.5 KB | Display | ![]() |
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Full document | ![]() | 477.2 KB | Display | |
Data in XML | ![]() | 54.2 KB | Display | |
Data in CIF | ![]() | 79.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 1masS S: Starting model for refinement |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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