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Open data
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Basic information
Entry | Database: PDB / ID: 1pvb | ||||||
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Title | X-RAY STRUCTURE OF A NEW CRYSTAL FORM OF PIKE 4.10 PARVALBUMIN | ||||||
![]() | PARVALBUMIN | ||||||
![]() | CALCIUM BINDING PROTEIN | ||||||
Function / homology | ![]() ion binding / axon terminus / axon / calcium ion binding / dendrite / cytoplasm Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() | ||||||
![]() | Declercq, J.P. / Tinant, B. / Parello, J. | ||||||
![]() | ![]() Title: X-ray structure of a new crystal form of pike 4.10 beta parvalbumin. Authors: Declercq, J.P. / Tinant, B. / Parello, J. #1: ![]() Title: Ionic Interactions with Parvalbumins. Crystal Structure Determination of Pike 4.10 Parvalbumin in Four Different Ionic Environments Authors: Declercq, J.P. / Tinant, B. / Parello, J. / Rambaud, J. #2: ![]() Title: Crystal Structure Determination and Refinement of Pike 4.10 Parvalbumin (Minor Component from Esox Lucius) Authors: Declercq, J.P. / Tinant, B. / Parello, J. / Etienne, G. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 33.7 KB | Display | ![]() |
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PDB format | ![]() | 21.9 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 412.7 KB | Display | ![]() |
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Full document | ![]() | 412.7 KB | Display | |
Data in XML | ![]() | 6.8 KB | Display | |
Data in CIF | ![]() | 8.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 11429.834 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() | ||||
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#2: Chemical | #3: Chemical | ChemComp-NH4 / | #4: Water | ChemComp-HOH / | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 1.98 Å3/Da / Density % sol: 37.88 % | ||||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | Num. obs: 9484 / % possible obs: 98 % / Observed criterion σ(I): 0 |
Reflection | *PLUS Highest resolution: 1.75 Å / Num. measured all: 18280 / Rmerge(I) obs: 0.051 |
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Processing
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Refinement | Resolution: 1.75→8 Å / σ(F): 4
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Displacement parameters | Biso mean: 8.7 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine analyze | Luzzati coordinate error obs: 0.15 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.75→8 Å
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Refine LS restraints |
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Refine LS restraints | *PLUS Type: x_angle_d / Dev ideal: 1.36 |