+Open data
-Basic information
Entry | Database: PDB / ID: 1phb | ||||||
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Title | INHIBITOR-INDUCED CONFORMATIONAL CHANGE IN CYTOCHROME P450-CAM | ||||||
Components | CYTOCHROME P450-CAM | ||||||
Keywords | OXIDOREDUCTASE(OXYGENASE) | ||||||
Function / homology | Function and homology information camphor 5-monooxygenase / camphor 5-monooxygenase activity / (+)-camphor catabolic process / iron ion binding / heme binding / cytoplasm Similarity search - Function | ||||||
Biological species | Pseudomonas putida (bacteria) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.6 Å | ||||||
Authors | Poulos, T.L. | ||||||
Citation | Journal: Biochemistry / Year: 1993 Title: Inhibitor-induced conformational change in cytochrome P-450CAM. Authors: Raag, R. / Li, H. / Jones, B.C. / Poulos, T.L. #1: Journal: Biochemistry / Year: 1987 Title: Crystal Structures of Metyrapone-and Phenylimidazole-Inhibited Complexes of Cytochrome P450-Cam Authors: Poulos, T.L. / Howard, A.J. #2: Journal: Biochemistry / Year: 1986 Title: Crystal Structure of Substrate-Free Pseudomonas Putida Cytochrome P450 Authors: Poulos, T.L. / Finzel, B.C. / Howard, A.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1phb.cif.gz | 99.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1phb.ent.gz | 75.7 KB | Display | PDB format |
PDBx/mmJSON format | 1phb.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ph/1phb ftp://data.pdbj.org/pub/pdb/validation_reports/ph/1phb | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Atom site foot note | 1: RESIDUE 89 IS A CIS PROLINE. / 2: RESIDUE 100 IS A CIS PROLINE. / 3: RESIDUE 106 IS A CIS PROLINE. / 4: SEE REMARK 8. |
-Components
#1: Protein | Mass: 46588.879 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Pseudomonas putida (bacteria) / References: UniProt: P00183, camphor 5-monooxygenase |
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#2: Chemical | ChemComp-HEM / |
#3: Chemical | ChemComp-PFZ / |
#4: Water | ChemComp-HOH / |
Nonpolymer details | SOLVENT MOLECULE 515 IS VERY LIKELY A CATION. THE AUTHORS BASED THIS CONCLUSION ON THE OCTAHEDRAL ...SOLVENT MOLECULE 515 IS VERY LIKELY A CATION. THE AUTHORS BASED THIS CONCLUSION |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.2 Å3/Da / Density % sol: 44.16 % | ||||||||||||||||||||||||||||||
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Crystal grow | *PLUS Temperature: 12-15 ℃ / pH: 7 / Method: unknown / Details: Poulos, T.L., (1982) J. Biol. Chem., 257, 10427. | ||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 2.06 Å / % possible obs: 0.067 % / Num. measured all: 75552 |
-Processing
Software | Name: PROLSQ / Classification: refinement | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Refinement | Rfactor obs: 0.19 / Highest resolution: 1.6 Å | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 1.6 Å
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Refine LS restraints |
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Software | *PLUS Name: PROLSQ / Classification: refinement | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Highest resolution: 2.1 Å / Lowest resolution: 10 Å / Num. reflection obs: 19152 / Rfactor Rwork: 0.196 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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