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- PDB-1pdc: REFINED SOLUTION STRUCTURE AND LIGAND-BINDING PROPERTIES OF PDC-1... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1pdc | ||||||
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Title | REFINED SOLUTION STRUCTURE AND LIGAND-BINDING PROPERTIES OF PDC-109 DOMAIN B. A COLLAGEN-BINDING TYPE II DOMAIN | ||||||
![]() | SEMINAL FLUID PROTEIN PDC-109 | ||||||
![]() | COLLAGEN-BINDING TYPE II DOMAIN | ||||||
Function / homology | ![]() positive regulation of sperm capacitation / phospholipid efflux / sperm capacitation / single fertilization / heparin binding / cell surface / extracellular space Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR | ||||||
![]() | Llinas, M. / Constantine, K.L. / Patthy, L. | ||||||
![]() | ![]() Title: Refined solution structure and ligand-binding properties of PDC-109 domain b. A collagen-binding type II domain. Authors: Constantine, K.L. / Madrid, M. / Banyai, L. / Trexler, M. / Patthy, L. / Llinas, M. #1: ![]() Title: Sequence-Specific 1H NMR Assignments and Structural Characterization of Bovine Seminal Fluid Protein Pdc-109 Domain B Authors: Constantine, K.L. / Ramesh, V. / Banyai, L. / Trexler, M. / Patthy, L. / Llinas, M. #2: ![]() Title: The Collagen-Binding Site of Type-II Units of Bovine Seminal Fluid Protein Pdc-109 and Fibronectin Authors: Banyai, L. / Trexler, M. / Koncz, S. / Gyenes, M. / Sipos, G. / Patthy, L. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 21.5 KB | Display | ![]() |
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PDB format | ![]() | 15.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 342.6 KB | Display | ![]() |
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Full document | ![]() | 350.2 KB | Display | |
Data in XML | ![]() | 3.6 KB | Display | |
Data in CIF | ![]() | 4.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Atom site foot note | 1: RESIDUE PRO 4 IS A CIS PROLINE. | |||||||||
NMR ensembles |
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Components
#1: Protein/peptide | Mass: 5379.239 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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Processing
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NMR software |
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NMR ensemble | Conformers submitted total number: 1 |