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Yorodumi- PDB-1hxs: CRYSTAL STRUCTURE OF MAHONEY STRAIN OF POLIOVIRUS AT 2.2A RESOLUTION -
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Basic information
| Entry | Database: PDB / ID: 1hxs | |||||||||
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| Title | CRYSTAL STRUCTURE OF MAHONEY STRAIN OF POLIOVIRUS AT 2.2A RESOLUTION | |||||||||
Components | (GENOME POLYPROTEIN, COAT PROTEIN ...) x 4 | |||||||||
Keywords | VIRUS / Picornavirus / Poliovirus / Coat Protein / ab initio phase determinaion / Icosahedral virus | |||||||||
| Function / homology | Function and homology informationsymbiont-mediated suppression of host translation initiation / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity / ribonucleoside triphosphate phosphatase activity / picornain 2A / symbiont-mediated suppression of host mRNA export from nucleus / symbiont genome entry into host cell via pore formation in plasma membrane / picornain 3C / T=pseudo3 icosahedral viral capsid ...symbiont-mediated suppression of host translation initiation / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity / ribonucleoside triphosphate phosphatase activity / picornain 2A / symbiont-mediated suppression of host mRNA export from nucleus / symbiont genome entry into host cell via pore formation in plasma membrane / picornain 3C / T=pseudo3 icosahedral viral capsid / host cell cytoplasmic vesicle membrane / nucleoside-triphosphate phosphatase / channel activity / monoatomic ion transmembrane transport / RNA helicase activity / endocytosis involved in viral entry into host cell / symbiont-mediated activation of host autophagy / RNA-directed RNA polymerase / cysteine-type endopeptidase activity / viral RNA genome replication / RNA-directed RNA polymerase activity / DNA-templated transcription / virion attachment to host cell / host cell nucleus / structural molecule activity / proteolysis / RNA binding / zinc ion binding / ATP binding / membrane Similarity search - Function | |||||||||
| Biological species | Human poliovirus 1 | |||||||||
| Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 2.2 Å | |||||||||
Authors | Miller, S.T. / Hogle, J.M. / Filman, D.J. | |||||||||
Citation | Journal: J.Mol.Biol. / Year: 2001Title: Ab initio phasing of high-symmetry macromolecular complexes: successful phasing of authentic poliovirus data to 3.0 A resolution. Authors: Miller, S.T. / Hogle, J.M. / Filman, D.J. #1: Journal: To be PublishedTitle: Ab initio Phasing of High-Symmetry Macromolecular Complexes: Successful Phasing of Authentic Poliovirus Data to 3.0A Resolution Authors: Miller, S.T. / Hogle, J.M. / Filman, D.J. #2: Journal: Acta Crystallogr.,Sect.D / Year: 1996Title: A Genetic Algorithm for the ab initio phasing of Icosahedral Viruses Authors: Miller, S.T. / Hogle, J.M. / Filman, D.J. #3: Journal: Nat.Struct.Biol. / Year: 1997Title: Structural Studies of Poliovirus Mutants that overcome receptor defects Authors: Wien, M.W. / Curry, S. / Filman, D.J. / Hogle, J.M. #4: Journal: Embo J. / Year: 1989Title: Structural factors that control conformational transitions and serotype specificity in type 3 poliovirus Authors: Filman, D.J. / Syed, R. / Chow, M. / Macadam, A.J. / Minor, P.D. / Hogle, J.M. #5: Journal: Science / Year: 1985Title: Three-dimensional structure of poliovirus at 2.9A resolution Authors: Hogle, J.M. / Chow, M. / Filman, D.J. #6: Journal: J.APPL.CRYSTALLOGR. / Year: 1999Title: Collection of very low resolution protein data Authors: Miller, S.T. / Genova, J.G. / Hogle, J.M. | |||||||||
| History |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 1hxs.cif.gz | 196 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb1hxs.ent.gz | 150.5 KB | Display | PDB format |
| PDBx/mmJSON format | 1hxs.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 1hxs_validation.pdf.gz | 438.7 KB | Display | wwPDB validaton report |
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| Full document | 1hxs_full_validation.pdf.gz | 453.7 KB | Display | |
| Data in XML | 1hxs_validation.xml.gz | 19.2 KB | Display | |
| Data in CIF | 1hxs_validation.cif.gz | 32.5 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/hx/1hxs ftp://data.pdbj.org/pub/pdb/validation_reports/hx/1hxs | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 1asjS S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Symmetry | Point symmetry: (Hermann–Mauguin notation: 532 / Schoenflies symbol: I (icosahedral)) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Noncrystallographic symmetry (NCS) | NCS oper:
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Human poliovirus 1
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