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- PDB-1ghe: CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH A... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1ghe | ||||||
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Title | CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A | ||||||
![]() | ACETYLTRANSFERASE | ||||||
![]() | TRANSFERASE / Acyl Coenzyme A complex | ||||||
Function / homology | ![]() acyltransferase activity, transferring groups other than amino-acyl groups / Transferases; Acyltransferases; Transferring groups other than aminoacyl groups Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() | ||||||
![]() | He, H. / Ding, Y. / Bartlam, M. / Sun, F. / Le, Y. / Qin, X. / Tang, H. / Zhang, R. / Joachimiak, A. / Liu, Y. ...He, H. / Ding, Y. / Bartlam, M. / Sun, F. / Le, Y. / Qin, X. / Tang, H. / Zhang, R. / Joachimiak, A. / Liu, Y. / Zhao, N. / Rao, Z. | ||||||
![]() | ![]() Title: Crystal Structure of Tabtoxin Resistance Protein Complexed with Acetyl Coenzyme A Reveals the Mechanism for beta-Lactam Acetylation Authors: He, H. / Ding, Y. / Bartlam, M. / Sun, F. / Le, Y. / Qin, X. / Tang, H. / Zhang, R. / Joachimiak, A. / Liu, Y. / Zhao, N. / Rao, Z. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 82.3 KB | Display | ![]() |
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PDB format | ![]() | 62.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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2 | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 19492.443 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() Species: Pseudomonas amygdali / Plasmid: PQE-30 / Production host: ![]() ![]() References: UniProt: P16966, Transferases; Acyltransferases; Transferring groups other than aminoacyl groups #2: Chemical | #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.42 Å3/Da / Density % sol: 49.1 % | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | Temperature: 291 K / Method: hanging drop/vapor diffusion / pH: 8 Details: PEG 4000, sodium acetate, Tris-HCL, pH 8.0, HANGING DROP/VAPOR DIFFUSION, temperature 291.0K | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Crystal grow | *PLUS Temperature: 291 K / Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 115 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: SBC-2 / Detector: CCD / Date: Sep 1, 2000 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.9639 Å / Relative weight: 1 |
Reflection | Resolution: 1.4→100 Å / Num. all: 105976 / Num. obs: 93060 / % possible obs: 95.3 % / Observed criterion σ(I): -3 / Redundancy: 3 % / Biso Wilson estimate: 13.4 Å2 / Rmerge(I) obs: 0.067 / Net I/σ(I): 5.9 |
Reflection shell | Resolution: 1.4→1.45 Å / Redundancy: 1 % / Rmerge(I) obs: 0.32 / Num. unique all: 4747 / % possible all: 65 |
Reflection | *PLUS Highest resolution: 1.49 Å / Lowest resolution: 100 Å / Num. obs: 56060 / % possible obs: 92 % / Num. measured all: 307917 / Rmerge(I) obs: 0.071 |
Reflection shell | *PLUS Mean I/σ(I) obs: 2.5 |
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Processing
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Refinement | Resolution: 1.55→30 Å / σ(F): 0 / σ(I): 0 / Stereochemistry target values: Engh & Huber / Details: CNS
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Refinement step | Cycle: LAST / Resolution: 1.55→30 Å
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Refine LS restraints |
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Refinement | *PLUS Lowest resolution: 30 Å / % reflection Rfree: 10 % / Rfactor Rfree: 0.23 | |||||||||||||||||||||
Solvent computation | *PLUS | |||||||||||||||||||||
Displacement parameters | *PLUS | |||||||||||||||||||||
Refine LS restraints | *PLUS
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