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Open data
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Basic information
Entry | Database: PDB / ID: 1e9p | ||||||
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Title | Crystal structure of bovine Cu, Zn SOD to 1.7 Angstrom (3 of 3) | ||||||
![]() | (SUPEROXIDE DISMUTASE![]() | ||||||
![]() | ![]() ![]() ![]() ![]() | ||||||
Function / homology | ![]() neurofilament cytoskeleton organization / protein phosphatase 2B binding / relaxation of vascular associated smooth muscle / response to superoxide / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Hough, M.A. / Hasnain, S.S. | ||||||
![]() | ![]() Title: Conformational Variability of the Cu Site in One Subunit of Bovine Cuzn Superoxide Dismutase: The Importance of Mobility in the Glu119-Leu142 Loop Region for Catalytic Function. Authors: Hough, M.A. / Strange, R.W. / Hasnain, S.S. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 70.5 KB | Display | ![]() |
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PDB format | ![]() | 51.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 1e9oC ![]() 1e9qC ![]() 1cbjS S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | ![]() Mass: 15362.827 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() ![]() ![]() | ||||||
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#2: Protein | ![]() Mass: 15306.700 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() ![]() ![]() | ||||||
#3: Chemical | ![]() #4: Chemical | ChemComp-ZN / | #5: Water | ChemComp-HOH / | ![]() Compound details | DESTROYS RADICALS TOXIC TO BIOLOGICAL SYSTEMS WHICH ARE NORMALLY PRODUCED WITHIN THE CELLS 2 ...DESTROYS RADICALS TOXIC TO BIOLOGICAL | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.95 Å3/Da / Density % sol: 55 % | |||||||||||||||
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Crystal grow![]() | pH: 6.5 / Details: pH 6.50 | |||||||||||||||
Crystal grow | *PLUS Temperature: 4 ℃ / Method: vapor diffusion | |||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 287 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: FUJI / Detector: IMAGE PLATE |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 1.7→75 Å / Num. obs: 104800 / % possible obs: 91.2 % / Redundancy: 3 % / Rmerge(I) obs: 0.065 / Net I/σ(I): 9.8 |
Reflection shell | Resolution: 1.7→1.78 Å / Redundancy: 2.6 % / Rmerge(I) obs: 0.3 / Mean I/σ(I) obs: 2.7 / % possible all: 91 |
Reflection | *PLUS Num. obs: 40372 / Num. measured all: 104800 |
Reflection shell | *PLUS % possible obs: 91 % |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: PDB ENTRY 1CBJ Resolution: 1.7→75 Å / SU B: 2.2 / Cross valid method: THROUGHOUT / σ(F): 0 / ESU R: 0.09
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Displacement parameters | Biso mean: 22.4 Å2 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.7→75 Å
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Refine LS restraints |
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