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- EMDB-13111: Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome -

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Basic information

Entry
Database: EMDB / ID: EMD-13111
TitleCryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome
Map data
Sample
  • Complex: 80S ribosome from 1 hpf zebrafish embryosEukaryotic ribosome
    • RNA: x 4 types
    • Protein or peptide: x 78 types
  • Ligand: x 2 types
Function / homology
Function and homology information


Hypusine synthesis from eIF5A-lysine / Platelet degranulation / optokinetic behavior / L13a-mediated translational silencing of Ceruloplasmin expression / SRP-dependent cotranslational protein targeting to membrane / RMTs methylate histone arginines / TNFR1-mediated ceramide production / : / : / Formation of a pool of free 40S subunits ...Hypusine synthesis from eIF5A-lysine / Platelet degranulation / optokinetic behavior / L13a-mediated translational silencing of Ceruloplasmin expression / SRP-dependent cotranslational protein targeting to membrane / RMTs methylate histone arginines / TNFR1-mediated ceramide production / : / : / Formation of a pool of free 40S subunits / Formation of the ternary complex, and subsequently, the 43S complex / Ribosomal scanning and start codon recognition / : / Protein methylation / Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) / Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) / mTORC1-mediated signalling / brain segmentation / TNFR1-induced NF-kappa-B signaling pathway / Regulation of TNFR1 signaling / convergent extension involved in gastrulation / : / Neutrophil degranulation / primitive hemopoiesis / embryonic retina morphogenesis in camera-type eye / death domain binding / positive regulation of translational termination / mitochondrial cytochrome c oxidase assembly / ribosome hibernation / hemoglobin biosynthetic process / : / positive regulation of translational elongation / chordate embryonic development / embryonic brain development / positive regulation of gastrulation / ribosomal subunit / exocrine pancreas development / anatomical structure development / laminin receptor activity / mitochondrial large ribosomal subunit / positive regulation of translational fidelity / definitive hemopoiesis / pancreas development / regulation of establishment of cell polarity / cytoplasmic side of rough endoplasmic reticulum membrane / regulation of innate immune response / erythrocyte development / translational elongation / negative regulation of Wnt signaling pathway / regulation of cell division / erythrocyte maturation / endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / mitochondrial respiratory chain complex I assembly / protein-RNA complex assembly / positive regulation of translational initiation / translation regulator activity / hemopoiesis / intrinsic apoptotic signaling pathway by p53 class mediator / mRNA transport / endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / hematopoietic stem cell differentiation / rough endoplasmic reticulum / vasculogenesis / laminin binding / translation elongation factor activity / rescue of stalled ribosome / translation initiation factor binding / nuclear pore / maturation of SSU-rRNA / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / class I DNA-(apurinic or apyrimidinic site) endonuclease activity / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / translation repressor activity / positive regulation of apoptotic signaling pathway / maturation of LSU-rRNA / ribosomal large subunit biogenesis / cellular response to amino acid starvation / translation initiation factor activity / DNA-(apurinic or apyrimidinic site) lyase / small-subunit processome / erythrocyte differentiation / positive regulation of RNA splicing / negative regulation of autophagy / protein kinase C binding / apoptotic signaling pathway / brain development / modification-dependent protein catabolic process / mRNA 5'-UTR binding / ribosomal small subunit biogenesis / regulation of erythrocyte differentiation / ribosomal large subunit assembly / small ribosomal subunit rRNA binding / protein tag activity / spindle / ribosomal small subunit assembly / rRNA processing / cytosolic small ribosomal subunit / regulation of protein localization / large ribosomal subunit rRNA binding / cellular response to xenobiotic stimulus
Similarity search - Function
DAP1/DAPL1 / Death-associated protein / Intracellular hyaluronan-binding protein 4, N-terminal domain / Intracellular hyaluronan-binding protein 4 N-terminal / PA2G4 family / Hyaluronan / mRNA binding family / RNA binding protein HABP4/SERBP1 / Translation elongation factor, IF5A, hypusine site / Eukaryotic initiation factor 5A hypusine signature. / Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold ...DAP1/DAPL1 / Death-associated protein / Intracellular hyaluronan-binding protein 4, N-terminal domain / Intracellular hyaluronan-binding protein 4 N-terminal / PA2G4 family / Hyaluronan / mRNA binding family / RNA binding protein HABP4/SERBP1 / Translation elongation factor, IF5A, hypusine site / Eukaryotic initiation factor 5A hypusine signature. / Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold / Translation elongation factor IF5A-like / Translation elongation factor, IF5A C-terminal / Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold / Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site / Methionine aminopeptidase subfamily 2 signature. / Hyaluronan/mRNA-binding protein / Hyaluronan / mRNA binding family / Ubiquitin-like protein FUBI / 40S ribosomal protein SA / 40S ribosomal protein SA, C-terminal domain / 40S ribosomal protein SA C-terminus / Ribosomal protein L6, N-terminal / Ribosomal protein L6, N-terminal domain / Ribosomal protein L30e / Ribosomal protein L28e / Ribosomal protein L2, archaeal-type / Ribosomal L15/L27a, N-terminal / Elongation Factor G, domain II / Elongation Factor G, domain III / Ribosomal protein L23 / Ribosomal L28e/Mak16 / Peptidase M24 / Metallopeptidase family M24 / Ribosomal L28e protein family / Creatinase/aminopeptidase-like / Translation elongation factor EFG/EF2, domain IV / Elongation factor G, domain IV / Elongation factor G, domain IV / Elongation factor G C-terminus / Ribosomal protein L41 / Elongation factor EFG, domain V-like / Elongation factor G C-terminus / Ribosomal protein L41 / EF-G domain III/V-like / Small (40S) ribosomal subunit Asc1/RACK1 / metallochaperone-like domain / TRASH domain / Ribosomal protein S21e, conserved site / Ribosomal protein S26e / Ribosomal protein S26e superfamily / Ribosomal protein S19e, conserved site / Ribosomal protein S26e / Ribosomal protein L29e / Ribosomal protein S10, eukaryotic/archaeal / Ribosomal protein S25 / Ribosomal protein S26e signature. / Ribosomal protein S17e, conserved site / Ribosomal protein S2, eukaryotic / Tr-type G domain, conserved site / Ribosomal protein S30 / 40S ribosomal protein S29/30S ribosomal protein S14 type Z / Translational (tr)-type guanine nucleotide-binding (G) domain signature. / Ribosomal L29e protein family / Ribosomal protein S21e / Ribosomal protein S21e superfamily / Ribosomal protein S21e / Ribosomal protein S3, eukaryotic/archaeal / S25 ribosomal protein / Ribosomal protein L10e, conserved site / Ribosomal protein L10e / Ribosomal protein L27e, conserved site / Ribosomal protein S19A/S15e / Ribosomal protein S21e signature. / Ribosomal protein S30 / Ribosomal protein S3Ae, conserved site / Ribosomal protein S17e / Ribosomal protein S17e-like superfamily / Ribosomal protein S2, eukaryotic/archaeal / Ribosomal protein S19e / Ribosomal_S19e / Ribosomal protein S5, eukaryotic/archaeal / Ribosomal protein S8e, conserved site / 40S ribosomal protein S11, N-terminal / 40S ribosomal protein S1/3, eukaryotes / Ribosomal protein S6, eukaryotic / Ribosomal protein L24e, conserved site / Ribosomal protein S7e / 40S ribosomal protein S4, C-terminal domain / Ribosomal protein L34e, conserved site / Eukaryotic Ribosomal Protein L27, KOW domain / Ribosomal protein S4e, N-terminal, conserved site / Ribosomal S17 / Ribosomal protein S19e signature. / Ribosomal protein L44e / Ribosomal protein L38e / Ribosomal protein L38e superfamily / Ribosomal protein L27e / Ribosomal protein L27e superfamily / Ribosomal protein L22e / Ribosomal protein L22e superfamily
Similarity search - Domain/homology
60S ribosomal protein L41 / 60S ribosomal protein L24 / Zgc:171772 / 60S ribosomal protein L14 / 40S ribosomal protein S23 / Zgc:103482 / 40S ribosomal protein S24 / 60S ribosomal protein L28 / Ribosomal protein L22 / Ribosomal protein L23a ...60S ribosomal protein L41 / 60S ribosomal protein L24 / Zgc:171772 / 60S ribosomal protein L14 / 40S ribosomal protein S23 / Zgc:103482 / 40S ribosomal protein S24 / 60S ribosomal protein L28 / Ribosomal protein L22 / Ribosomal protein L23a / Guanine nucleotide-binding protein subunit beta-2-like 1 / 60S ribosomal protein L36a / 40S ribosomal protein S7 / 40S ribosomal protein S8 / 40S ribosomal protein S16 / 60S ribosomal protein L13a / 60S ribosomal protein L32 / 60S ribosomal protein L31 / Ubiquitin-60S ribosomal protein L40 / 40S ribosomal protein S27 / 60S ribosomal protein L6 / 40S ribosomal protein S17 / Rpl3 protein / 60S ribosomal protein L9 / 40S ribosomal protein S4, X isoform / 60S ribosomal protein L18 / 60S ribosomal protein L29 / 60S ribosomal protein L38 / 60S ribosomal protein L35a / 40S ribosomal protein S6 / Ribosomal protein L15 / 40S ribosomal protein S13 / Ribosomal protein L39 / Ribosomal protein L5b / 60S ribosomal protein L11 / Ribosomal protein L37 / 60S ribosomal protein L21 / 40S ribosomal protein S2 / Eukaryotic translation initiation factor 5A / 60S ribosomal protein L8 / 60S ribosomal protein L27a / Eukaryotic translation elongation factor 2 / 60S ribosomal protein L19 / 40S ribosomal protein S9 / 40S ribosomal protein S26 / 40S ribosomal protein S20 / 40S ribosomal protein S25 / 40S ribosomal protein S28 / Ribosomal protein S14 / 40S ribosomal protein S19 / 40S ribosomal protein S3a / 60S ribosomal protein L7a / FAU ubiquitin-like and ribosomal protein S30 fusion a / 60S ribosomal protein L23 / Ribosomal protein S5 / 60S ribosomal protein L36 / Ribosomal protein L7 / 40S ribosomal protein S29 / 40S ribosomal protein S15a / 40S ribosomal protein S15 / 60S ribosomal protein L26 / 40S ribosomal protein S10 / 60S ribosomal protein L17 / 40S ribosomal protein S21 / 60S ribosomal protein L30 / 40S ribosomal protein S11 / 60S ribosomal protein L27 / 60S ribosomal protein L10 / DNA-(apurinic or apyrimidinic site) lyase / 60S ribosomal protein L4 / 60S ribosomal protein L18a / 60S ribosomal protein L34 / 40S ribosomal protein SA / Novel protein similar to human proliferation-associated 2G4 protein (PA2G4) / 40S ribosomal protein S18 / 60S ribosomal protein L35 / 60S ribosomal protein L13 / Death-associated protein-like 1 homolog
Similarity search - Component
Biological speciesDanio rerio (zebrafish) / Zebrafish, Brachydanio rerio
Methodsingle particle reconstruction / cryo EM / Resolution: 3.2 Å
AuthorsLeesch F / Lorenzo-Orts L / Grishkovskaya I / Kandolf S / Belacic K / Meinhart A / Haselbach D / Pauli A
Funding support Austria, Switzerland, 5 items
OrganizationGrant numberCountry
Austrian Research Promotion AgencyFFG-852936 Austria
Austrian Science FundSTART Projekt Y 1031-B28 Austria
Austrian Science FundSFB RNA-Deco F 80 Austria
Swiss National Science FoundationP2GEP3_191204 Switzerland
European Molecular Biology Organization (EMBO)ALTF 1165-2019
CitationJournal: Nature / Year: 2023
Title: A molecular network of conserved factors keeps ribosomes dormant in the egg.
Authors: Friederike Leesch / Laura Lorenzo-Orts / Carina Pribitzer / Irina Grishkovskaya / Josef Roehsner / Anastasia Chugunova / Manuel Matzinger / Elisabeth Roitinger / Katarina Belačić / Susanne ...Authors: Friederike Leesch / Laura Lorenzo-Orts / Carina Pribitzer / Irina Grishkovskaya / Josef Roehsner / Anastasia Chugunova / Manuel Matzinger / Elisabeth Roitinger / Katarina Belačić / Susanne Kandolf / Tzi-Yang Lin / Karl Mechtler / Anton Meinhart / David Haselbach / Andrea Pauli /
Abstract: Ribosomes are produced in large quantities during oogenesis and are stored in the egg. However, the egg and early embryo are translationally repressed. Here, using mass spectrometry and cryo-electron ...Ribosomes are produced in large quantities during oogenesis and are stored in the egg. However, the egg and early embryo are translationally repressed. Here, using mass spectrometry and cryo-electron microscopy analyses of ribosomes isolated from zebrafish (Danio rerio) and Xenopus laevis eggs and embryos, we provide molecular evidence that ribosomes transition from a dormant state to an active state during the first hours of embryogenesis. Dormant ribosomes are associated with four conserved factors that form two modules, consisting of Habp4-eEF2 and death associated protein 1b (Dap1b) or Dap in complex with eIF5a. Both modules occupy functionally important sites and act together to stabilize ribosomes and repress translation. Dap1b (also known as Dapl1 in mammals) is a newly discovered translational inhibitor that stably inserts into the polypeptide exit tunnel. Addition of recombinant zebrafish Dap1b protein is sufficient to block translation and reconstitute the dormant egg ribosome state in a mammalian translation extract in vitro. Thus, a developmentally programmed, conserved ribosome state has a key role in ribosome storage and translational repression in the egg.
History
DepositionJun 24, 2021-
Header (metadata) releaseJul 13, 2022-
Map releaseJul 13, 2022-
UpdateFeb 8, 2023-
Current statusFeb 8, 2023Processing site: PDBe / Status: Released

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Structure visualization

Supplemental images

emd_13111.png

Downloads & links

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Map

FileDownload / File: emd_13111.map.gz / Format: CCP4 / Size: 421.9 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Voxel sizeX=Y=Z: 1.06 Å
Density
Contour LevelBy AUTHOR: 0.9
Minimum - Maximum-0.55146945 - 8.711687
Average (Standard dev.)0.08918378 (±0.28424817)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions480480480
Spacing480480480
CellA=B=C: 508.8 Å
α=β=γ: 90.0 °

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Supplemental data

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Sample components

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Entire : 80S ribosome from 1 hpf zebrafish embryos

EntireName: 80S ribosome from 1 hpf zebrafish embryosEukaryotic ribosome
Components
  • Complex: 80S ribosome from 1 hpf zebrafish embryosEukaryotic ribosome
    • RNA: 18S rRNA18S ribosomal RNA
    • Protein or peptide: 40S ribosomal protein SA
    • Protein or peptide: 40S ribosomal protein S3a
    • Protein or peptide: 40S ribosomal protein S2
    • Protein or peptide: 40S ribosomal protein S4, X isoformRibosome
    • Protein or peptide: 40S ribosomal protein S6
    • Protein or peptide: 40S ribosomal protein S7
    • Protein or peptide: 40S ribosomal protein S8
    • Protein or peptide: 40S ribosomal protein S9
    • Protein or peptide: 40S ribosomal protein S11
    • Protein or peptide: 40S ribosomal protein S13
    • Protein or peptide: Ribosomal protein S14
    • Protein or peptide: 40S ribosomal protein S17
    • Protein or peptide: 40S ribosomal protein S21
    • Protein or peptide: 40S ribosomal protein S15a
    • Protein or peptide: 40S ribosomal protein S23
    • Protein or peptide: 40S ribosomal protein S24
    • Protein or peptide: 40S ribosomal protein S26
    • Protein or peptide: 40S ribosomal protein S27
    • Protein or peptide: 40S ribosomal protein S30
    • Protein or peptide: DNA-(apurinic or apyrimidinic site) lyaseDNA-(apurinic or apyrimidinic site) lyase
    • Protein or peptide: Ribosomal protein S5
    • Protein or peptide: Ribosomal protein S10
    • Protein or peptide: 40S ribosomal protein S15
    • Protein or peptide: Ribosomal protein S16
    • Protein or peptide: 40S ribosomal protein S20
    • Protein or peptide: 40S ribosomal protein S28
    • Protein or peptide: 40S ribosomal protein S29
    • Protein or peptide: Guanine nucleotide-binding protein subunit beta-2-like 1
    • Protein or peptide: 40S ribosomal protein S25
    • Protein or peptide: 40S ribosomal protein S19
    • Protein or peptide: 40S ribosomal protein S18
    • Protein or peptide: Zgc:103482
    • Protein or peptide: 60S ribosomal protein L27
    • Protein or peptide: 60S ribosomal protein L29
    • Protein or peptide: 60S ribosomal protein L30
    • Protein or peptide: 60S ribosomal protein L31
    • Protein or peptide: Ribosomal protein L32
    • Protein or peptide: 60S ribosomal protein L35a
    • Protein or peptide: 60S ribosomal protein L34
    • Protein or peptide: 60S ribosomal protein L35
    • Protein or peptide: 60S ribosomal protein L36
    • Protein or peptide: Ribosomal protein L37
    • Protein or peptide: 60S ribosomal protein L38
    • Protein or peptide: 60S ribosomal protein L36a
    • Protein or peptide: Zgc:171772
    • Protein or peptide: 60S ribosomal protein L8
    • Protein or peptide: Ribosomal protein L3
    • Protein or peptide: Ribosomal protein L460S ribosomal protein L4
    • Protein or peptide: Ribosomal protein L5bRibosome
    • Protein or peptide: 60S ribosomal protein L6
    • Protein or peptide: Ribosomal protein L7
    • Protein or peptide: 60S ribosomal protein L7a
    • Protein or peptide: 60S ribosomal protein L9
    • Protein or peptide: 60S ribosomal protein L11
    • Protein or peptide: 60S ribosomal protein L13
    • Protein or peptide: 60S ribosomal protein L14
    • Protein or peptide: Ribosomal protein L15
    • Protein or peptide: 60S ribosomal protein L13a
    • Protein or peptide: 60S ribosomal protein L17
    • Protein or peptide: Ribosomal protein L18
    • Protein or peptide: 60S ribosomal protein L19
    • Protein or peptide: 60S ribosomal protein L21
    • Protein or peptide: Ribosomal protein L2260S ribosomal protein L22
    • Protein or peptide: 60S ribosomal protein L23
    • Protein or peptide: 60S ribosomal protein L24
    • Protein or peptide: Ribosomal protein L23aRibosome
    • Protein or peptide: ATPase H+ transporting V0 subunit e1
    • Protein or peptide: Ribosomal protein L39
    • Protein or peptide: 60S ribosomal protein L41
    • Protein or peptide: 60S ribosomal protein L28
    • Protein or peptide: 60S ribosomal protein L10
    • Protein or peptide: 60S ribosomal protein L18a
    • Protein or peptide: 60S ribosomal protein L40
    • Protein or peptide: 60S ribosomal protein L27a
    • RNA: 28S rRNA28S ribosomal RNA
    • RNA: 5S rRNA5S ribosomal RNA
    • RNA: 5.8S rRNA5.8S ribosomal RNA
    • Protein or peptide: Novel protein similar to human proliferation-associated 2G4 protein (PA2G4)
    • Protein or peptide: Eukaryotic translation elongation factor 2
    • Protein or peptide: Eukaryotic translation initiation factor 5A
    • Protein or peptide: Dap1b
  • Ligand: ZINC ION
  • Ligand: MAGNESIUM ION

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Supramolecule #1: 80S ribosome from 1 hpf zebrafish embryos

SupramoleculeName: 80S ribosome from 1 hpf zebrafish embryos / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#82
Source (natural)Organism: Danio rerio (zebrafish) / Tissue: 1 hpf embryos

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Macromolecule #1: 18S rRNA

MacromoleculeName: 18S rRNA / type: rna / ID: 1 / Number of copies: 1
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 625.9685 KDa
SequenceString: UACCUGGUUG AUCCUGCCAG UAAUAUAUGC UUGUCUCAAA GAUUAAGCCA UGCAAGUCUA AGUGCACACG GCCGGUACAG UGAAACUGC GAAUGGCUCA UUAAAUCAGU UAUGGUUCCU UUGAUCGCUC CACCCGGUUA CUUGGAUAAC UGUGGCAAUU C CAGAGCUA ...String:
UACCUGGUUG AUCCUGCCAG UAAUAUAUGC UUGUCUCAAA GAUUAAGCCA UGCAAGUCUA AGUGCACACG GCCGGUACAG UGAAACUGC GAAUGGCUCA UUAAAUCAGU UAUGGUUCCU UUGAUCGCUC CACCCGGUUA CUUGGAUAAC UGUGGCAAUU C CAGAGCUA AUACAUGCCA ACGAGCGCCG ACCUGGGCCG CCCUUCUCCC CUCGGGGCGG GGGGUGGGUA CCCGGGGACG CG UGCAUUU AUCAGAUCCA AAACCCAUGC GGGUGCGCGG GCGGUGGAGA GGGGGGCCUC GCGCCUACCC GCCGCCGUCC GCC CCCGGC CUCGCUUUGG UGACUCUAGA UAACCUCGGG CCGAUCGCGC GCCCUCGCGG CGGCGACGGU UCAUUCGAAU GUCU GCCCU AUCAACUUUC GAUGGUAGGU CCGUCGCCUA CCAUGGUGAC CACGGGUGAC GGGGAAUCAG GGUUCGAUUC CGGAG AGGG AGCCUGAGAA ACGGCUACCA CAUCCAAGGA AGGCAGCAGG CGCGCAAAUU ACCCAUUUCC GACACGGAGA GGUAGU GAC GAAAAAUAAC AAUGCAGGUC UCUUUCGAGG CCCUGCAAUU GGAAUGAGUG CAUCCCAAAC CCAUGGGCGA GGACCCA UU GGAGGGCAAG UCUGGUGCCA GCAGCCGCGG UAAUUCCAGC UCCAAUAGCG UAUGCUAACG UUGCUGCAGU UAAAAAGC U CGUAGUUGGA UCUCGGGGAC CGGGCCGCGC GGUCCGCCGC GAGGCGAGCC ACCGCCGGUC CCGGACCCCC AGGCCUCCC GGCGCCCCCC GGAUGCCCUU GACUGGGUGU CCUCGGCUUG GGGCCCGGAG CGUUUACUUU GAAAAAAUUA GAGUGUUCAA GGCAGGGCC GGCACCGCGC CCCAUUGAAU ACCCCAGCUA GGAAUAAUGG AAUAGGACCC CGGUUCUAUU UUCUGUGGGU U UCCGGAAC CCGGGGCCAU GAUCGAGAGG GACGGCCGGG GGCAUUCGUA UUGCGCCGCU AGAGGUGAAA UUCUUGGACC GG CGCAAGA CGGACCGGAG CGAAAGCGUU UGCCAAGAAC GUUUUCAUUA AUCAAGAACG AAAGUCGGAG GUUCGAAGAC GAU CAGAUA CCGUCGUAGU UCCGACCGUA AACGAUGCCG ACCCGCGAUC CGGCGGCGUU UAUUCCCAUG ACCCGCCGGG CAGC GUUGC GGGAAACCAC GAGUCUCUGG GCUCCGGGGG GAGUAUGGUU GCAAAGCUGA AACUUAAAGG AAUUGACGGA AGGGC ACCA CCAGGAGUGG AGCCUGCGGC UUAAUUUGAC UCAACACGGG GAACCUCACC CGGCCCGGAC ACGGAAAGGA UUGACA GAU UGACGGCUCU UUCUCGAUUC UGUGGGUGGU GGUGCAUGGC CGUUCGUAGU UGGUGGAGCG AUUUGUCUGG UUGAUUC CG AUAACGAACG AGACUCUGGC AUGCUAACUA GUUACGCGGC CCCGCGCGGU CGGCGUCUGC AACUUCUUAG AGGGACAA G UGGCGUUCAG CCACGCGAGA CUGAGCAAUA ACAGGUCUGU GAUGCCCUUA GAUGUCCGGG GCUGCACGCG CGCCACAAU GGGCGGAUCA ACGUGUGCCU ACCCUGCGCC GACAGGCGCG GGUAACCCGU UGAACCCCGC CCGUGAUGGG GACCGGGGAU UGAAACUAU UUCCCGAGAA CGAGGAAUUC CCAGUAAGCG CAGGUCAUCA GCUUGCGUUG AUUAAGUCCC UGCCCUUUGU A CACACCGC CCGUCGCUAC UACCGAUUGA GCGGCUCAGU GAGGUCCUCG GAUCGGCCCC GCCCGGGGCU CCCUUACCGG GG GCCCUGG UGGAGCGCCG AGAAGACGAU CGAACUCGGU CGUUUAGAGG AAGUAAAAGU CGUAACAAGG UUUCCGUAGG UGA ACCUGC GGAAGGAUCA UUA

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Macromolecule #76: 28S rRNA

MacromoleculeName: 28S rRNA / type: rna / ID: 76 / Number of copies: 1
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 1.382249125 MDa
SequenceString: CACGACCUCA GCUCAGACGA GAAGACCCGC UGAAUUUAAG CAUAUUACUA AGCGGAGGAA AAGAAACCAA CCGGGAUUCC CCCAGUAGC GGCGAGCGAA GAGGGAAAAG UCCAGCGCCG AAUCCCCGCC CCUCUGCCGA GGGCGAGGGA CCUGUGGCGU A CGGAGGGC ...String:
CACGACCUCA GCUCAGACGA GAAGACCCGC UGAAUUUAAG CAUAUUACUA AGCGGAGGAA AAGAAACCAA CCGGGAUUCC CCCAGUAGC GGCGAGCGAA GAGGGAAAAG UCCAGCGCCG AAUCCCCGCC CCUCUGCCGA GGGCGAGGGA CCUGUGGCGU A CGGAGGGC CGCCUCUCUC GGCGCGGGCC GGGGGGCCAA AGUCCUUCUG AUGGAGGCUU AGCCCGCGGA CGGUGUGAGG CC GGUGUCG GCCCCCGCCC CGCCGGGGUG CGGUUCCUCC CGGAGUCGGG UUGUUUGGGA AUGCAGCCCA AAGCGGGUGG UAA ACUCCA UCUAAGGCUA AAUACCGGCA CGAGACCGAU AGCGGACAAG UACCGUGAGG GAAAGUUGAA AAGAACUUUG AAGA GAGAG UUCAACAGGG CGUGAAACCG UUAAGAGGUA AACGGGUGGG GACCGCACCG UCCGCCCGGU GGAUUCAGCC CGGCG GGGC GGGGUCGGCC CGUCCGGUGC GCGCUCCCUU CGCUCCCUCA UUCCUGGGGG UGGCGCGGGG GGUUGACGCC CGGGCG AAG GCUCGGCCGC CGCCGGGUGC AUUUCCGCCG CGGUGGAGCG CCGCGACCGG CUCCGGUUCG GCUUGGAAGG GUCAGGG GG CGAAGGUGGC CCGUCGGUUC AGGCCGUCGG GCUUUACAGC GCCCUCCCGC CCCGACUUCG CCGCUUGCUC UCCGGGGC C GCGGGUGAGU GUCCUCCGCG CCCUCUCUGC CCUCCCUCCC UGUGGGGGGA GGUGCGGGGA CGGGGUCCCC CGCCCCCGG CGUGGCGCGA CAGGGGUGGA CUGUCCUCAG UCCGCCCACG GCUGCGCCGC GCCGCCCAGG GCGGGGAUCC GACCCACGUU CGGGCGCCC GAGGUCCGCG GCGACGCCGG CCUCCCACCC GACCCGUCUU GAAACACGGA CCAAGGAGUC CAACGCGCGC G CGAGUCAG AGGGUGGCUC GCGAGCCCCU GCGGCGCAAU GAAGGUGAGA ACGGGGGUCU CCCCCGGGUG GGAUCCCCCC GC CCCGGCG GGGGGCGCAC CACCGGCCCG CCUCGCGACC CUCCGGGGGG CAGGUGGAGU UGGAGCGCGC GCGAUGGCAC CCG AAAGAU GGUGAACUAU GCCUGGGCAG GGCGAAGCCA GGGGAAACUC UGGUGGAGGC CCGCCGCGGU CCUGACGUGC AAAU CGGUC GUCCGACCUG GGCAUAGGGG CGAAAGACUA AUCGAACCAU CUAGUAGCUG GUUCCCUCCG AAGUUUCCCU CAGGA UAGC UGGCGCUCGC CGAUCAAGCA GUUUUAUCCG GUAAAGCCAA UGACUAGAGG CCUUGGGGCC GAAACGGCCU CAACCU AUU CUCAAACUUU AAAUGGGUAA GAGGCCCGGC UCGCUGGCGC UGGAGCCGGG CGUGGAAUGC GACGCGCCUA GUGGGCC AU UUUUGGUAAG CAGAACUGGU GCUGCGGGAU GAACCGAACG CCGGGUUAAG GCGCCCGAUG CCGACGCUCA UCAGACCC C AUAAAAGGUG UUGGUUGAUA UAGACAGCAG GACGGUGGCC AUGGAAGUCG GCACCCGCCA AGGAGUGUGU AACAACUCA CCUGCCGAAU CAACUAGCCC UGAAAAUGGA UGGCGCUGGA GCGUCGGGCC CAUACCCGGC CGUCGACGGC ACAAGGGACA CGCGAGCGG UCGCGCGCGC UGCAAGCCUC GACGAGUAGG AGGGCCGCCG CGGUGGCGCC GAAGCCCAGG GCGCGGGCCC G GGUGGAGC CGCCGCGGGC GCAGAUCUUG GUGGUAGUAG CAAAUAUUCA AACGAGAGCU UUGAAGGCCG AAGUGGAGAA GG GUUCCAU GUGAACAGCA GUUGAACAUG GGUGAGCCGG UCCUAAGGGA CGGGCCUACG CCGUUCGGAG GGGAGGGGCG AUG GCCUCU GUCGCCCCCG CUCGACCGAA AGGGAGUCGG GUCCAGAUCC CCGAGCCCGG AGCGGCGGAG ACGGGCGCCG CGAG GCGCC CAGUGCGGUG ACGCAAACGA ACCCGGAGAU GCCGGCGGGU GCCCCGGGAA AGAGUUCUCU UUUCUUUGUG AAGGG CAGG GCGCCCUGGA ACGGGUUCGC CCCGAGAGAG GGGCCCGCGC CCUGGAAAGC GCCGCGCUUC UGGCGGCGUC CGGUGA GCU CUCGUCGGCC CUUGAAAAUC CGGGGGAGAA GGUGUAAAUC UCGCGCCGGG CCGUACCCAU AUCCGCAGCA GGUCUCC AA GGUGAACAGC CUCUGGCGUG UUGGAACAAG GCAGAGUAAG GGAAGUCGGC AAGUCAGAUC CGUAACUUCG GGAUAAGG A UUGGCUCUAA GGGCUGAGCC GGUCGGGCUG AGGUGCGAAG CGGGCCUGGG CCCGAGCCGC GACUGGGGGA GCGGCCGCC CCGAGGUGCC CUGACCCCCG UUCCCGAGCC GCGGGGGUGC GCGCGCGGUG GCGCGCGGUC CCUCUCUCCC CCCGCCGCGU CCGCCUCGG GCCUUUUUGC GGUCUCGACU CCCCCCGACU CUUCCCCUCC GCCCUUUCCC CGUCCGCGGG GGUCGGGCGG G GGGGUCUC GGAGGAGGGG GGGUGGAGAG GCCGUGGGGA GGAAAGGGGU GGUUCGUGGC GUCGGGGGGC AACGGGAGGG UC CUCGCCU GCCGCGCGAU GCCUCCGCUG GCCGGGGCCC GCGGGGGGCG GGAUGCGCAG CGGUUGGCGG CGGCGACCCU GGG CGCGCG CCGCGCCCUU CCCGCGGAUC UCCGCAGCUA CGGCCCCGCG CCGGGGCCCG CGUCCGCGCG UGCGCCCCCC UCCG GGGGA GUGGCGCGCG GCCUCGGCUC CCCCCGGUGC GGGCGCCUCG GCCGGCGGCU AGCAGCCAGC UUAGAACUGU CGCGG ACCA GGGGAAUCCG ACUGUUUAAU UAAAACAAAG CAUCGCGAAG GCCCUCGGCG GGUGUUGACG CGAUGUGAUU UCUGCC CAG UGCUCUGAAU GUCAAAGUGA AGAAAUUCAA CGAAGCGCGG GUAAACGGCG GGAGUAACUA UGACUCUCUU AAGGUAG CC AAAUGCCUCG UCAUCUAAUU AGUGACGCGC AUGAAUGGAU GAACGAGAUU CCCACUGUCC CUACCUGCUA UCUAGCGA A ACCACAGCCA AGGGAACGGG CUUGGCAGAA UCAGCGGGGA AAGAAGACCC UGUUGAGCUU GACUCUAGUC UGGCCCUGU GAAGAGACAU GAGGGGUGUA GAAUAAGUGG GAGGCCCCCG GGCUUCCCGG GCCGGCCGCC GGUGAAAUAC CACUACUCUU AUCGUUUCC UCACUUACCC GGUGAGGCGG GGAAGCCGGG CGUCCCCCGG CGGGGGCCGC CCCUGCUUCU GGCGUCAAGC G CCCCGGGG CCGUGCGGGG GGUGGGGGCA ACCCCCCUUC CCCUCCCGGC CGCCGACCGG GGCGCGACCC GCCCCGGGGA CA GCGUCAG GUGGGGAGUU UGACUGGGGC GGUACACCUG UCAAACGGUA ACGCAGGUGU CCUAAGGCGA GCUCAGGGGG GAC AGAAAC CUCCCGUAGA GCAGAAGGGC AAAAGCUCGC UUGAUCUUGA UUUUCAGUAU GAGUACGGAC CGCGAAAGCG GGGC CUCAC GAUCCUUCCG GCUUUUGGGG UUUUAAGCGG GAGGUGUCAG AAAAGUUACC ACAGGGAUAA CUGGCUUGUG GCGGC CAAG CGUUCAUAGC GACGUCGCUU UUUGAUCCUU CGAUGUCGGC UCUUCCUAUC AUUGUGAAGC AGAAUUCACC AAGCGU UGG AUUGUUCACC CACUAACAGG GAACGUGAGC UGGGUUUAGA CCGUCGUGAG ACAGGUUAGU UUUACCCUAC UGAUGUG AG CCGUUGUUGC AAUAGUAAUC CCGCUCAGUA CGAGAGGAAC CGCGGGUUCA GACAUUUGGU UCGUGCGCUU GGCUGAGG A GCCACUGGCG CGAAGCCACC AUCUGCGGGA UUAUGACUGA ACGCCUCUAA GUCAGAAUCC CGCCUAAAAG CAACGAUAC AGCAGCGCCG UCGGAUCUCC GAUAGGCCCC GGGUAACCGG GAAGCCCCUC UCCGGGGGGG CCCCCGGCGC GGAGAGCCAU UCGUGACAG GAACCGGGGG CGCGGCUAGA ACGAGCGCCG CCCCCUCUUC CAGUGACGCA CCGCAUGUUU GUGGGGAACC C GGUGCUUA AAUGACUCGU AGACGACCUG AUUCUGGGUC GGGGUGUCGU GCGUGGCAGA GCAGCUCUGU UGCUGCGAUC CA UUGAAAG UCAGCCCUCG AUCCAAGUUU UG

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Macromolecule #77: 5S rRNA

MacromoleculeName: 5S rRNA / type: rna / ID: 77 / Number of copies: 1
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 38.739027 KDa
SequenceString:
GCUUACGGCC AUACCACCCU GGAAAUGCCC GAUCUCAUCU GAACUCGGAA GUAAAGCAGG GUCGGGCCUG GUUAGUACUU GGAUGGGAG ACCGCCUGGG AAUACCAGGU GCUGUAAGCU A

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Macromolecule #78: 5.8S rRNA

MacromoleculeName: 5.8S rRNA / type: rna / ID: 78 / Number of copies: 1
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 50.823137 KDa
SequenceString:
AACUCUUAGC GGUGGAUCAC UCGGCUCGUG CGUCGAUGAA GAACGCAGCU AGCUGCGAGA ACUAAUGUGA AUUGCAGGAC ACACAUUGA UCAUCGACCU UUCGAACGCA CAUUGCGGCC CCGGGUCCAU CCCGGGGCCA CGCCUGUCUG AGGGUCGCC

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Macromolecule #2: 40S ribosomal protein SA

MacromoleculeName: 40S ribosomal protein SA / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 34.043191 KDa
SequenceString: MSGGLDVLQM KEEDVLKFLA AGTHLGGTNL DFQMEQYVYK RKSDGVYIIN LKKTWEKLLL AARAIVAIEN PADVCVISSR NTGQRAVLK FASATGSTTF AGRFTPGTFT NQIQAAFREP RLLIVTDPRA DHQPLTEASY VNIPTIALCN TDSPLRYVDI A IPCNNKGP ...String:
MSGGLDVLQM KEEDVLKFLA AGTHLGGTNL DFQMEQYVYK RKSDGVYIIN LKKTWEKLLL AARAIVAIEN PADVCVISSR NTGQRAVLK FASATGSTTF AGRFTPGTFT NQIQAAFREP RLLIVTDPRA DHQPLTEASY VNIPTIALCN TDSPLRYVDI A IPCNNKGP HSVGLMWWML AREVLRMRGT ISREHPWEVM PDLYFYRDPE EIEKEEQAAA EKAVGKEEFQ GEWTAPVPDF NQ PEVADWS EGVQVPSVPI QQFPAGIEAP GKPAPAEVYA EDWSAQPATE DWSAAPTAQA GDWGGATADW S

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Macromolecule #3: 40S ribosomal protein S3a

MacromoleculeName: 40S ribosomal protein S3a / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 30.256352 KDa
SequenceString: MAVGKNKRLT KGGKKGAKKK IVDPFSKKDW YDVKAPAMFN IRNLGKTLVT RTQGTRIASD GLKGRVFEVS LADLQNDEVA FRKFKLVTE DVQGKNCLTN FHGMDLTRDK MCSMVKKWQT MIEAHVDVKT TDGYLLRLFC VGFTKKRTNQ IRKTSYAQHQ Q VRQIRKKM ...String:
MAVGKNKRLT KGGKKGAKKK IVDPFSKKDW YDVKAPAMFN IRNLGKTLVT RTQGTRIASD GLKGRVFEVS LADLQNDEVA FRKFKLVTE DVQGKNCLTN FHGMDLTRDK MCSMVKKWQT MIEAHVDVKT TDGYLLRLFC VGFTKKRTNQ IRKTSYAQHQ Q VRQIRKKM MEIMTREVQT NDLKEVVNKL IPDSVGKDIE KACQSIYPLH DVYVRKVKML KKPKFELGKL MELHGEGGST SA AAKPAEG DTGAKVERAD GYEPPIQESV

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Macromolecule #4: 40S ribosomal protein S2

MacromoleculeName: 40S ribosomal protein S2 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 30.342279 KDa
SequenceString: MADDAGGRGG FRGGFGTGGR GRGRGRGRGR GRGRGARGGK SEDKEWVPVT KLGRLVKDMK IKSLEEIYLY SLPIKESEII DFFLGSALK DEVLKIMPVQ KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSII PVRRGYWGNK I GKPHTVPC ...String:
MADDAGGRGG FRGGFGTGGR GRGRGRGRGR GRGRGARGGK SEDKEWVPVT KLGRLVKDMK IKSLEEIYLY SLPIKESEII DFFLGSALK DEVLKIMPVQ KQTRAGQRTR FKAFVAIGDY NGHVGLGVKC SKEVATAIRG AIILAKLSII PVRRGYWGNK I GKPHTVPC KVTGRCGSVL VRLIPAPRGT GIVSAPVPKK LLMMAGIDDC YTSARGCTAT LGNFAKATFD AISKTYSYLT PD LWKETVF TKSPYQEFTD HLAKTHTRVS VQRTQGALPQ GTS

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Macromolecule #5: 40S ribosomal protein S4, X isoform

MacromoleculeName: 40S ribosomal protein S4, X isoform / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 29.746068 KDa
SequenceString: MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE VKKICMQRFI KIDGKVRTDI TYPTGFMDV VSIEKTGENF RLIYDVKGRF TVHRITNEEA KYKLCKVRKI LIGTKGIPHL VTHDARTIRY PDPLIKVNDT I RIDLDTGK ...String:
MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIIFLRN RLKYALTGDE VKKICMQRFI KIDGKVRTDI TYPTGFMDV VSIEKTGENF RLIYDVKGRF TVHRITNEEA KYKLCKVRKI LIGTKGIPHL VTHDARTIRY PDPLIKVNDT I RIDLDTGK ITDFIKFETG NMCMVTGGAN LGRIGVITNR EKHPGSFDVV HVKDSIGNSF ATRLSNIFVI GKGNKPWVSL PR GKGVRLT IAEERDKRLA AKQSSS

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Macromolecule #6: 40S ribosomal protein S6

MacromoleculeName: 40S ribosomal protein S6 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 28.778922 KDa
SequenceString: MKLNISFPAT GCQKLIEVDD ERKLRIFYEK RMATEVAADS LGDEWKGYVV RISGGNDKQG FPMKQGVLTH GRVRLLLSKG HSCYRPRRT GERKRKSVRG CIVDANLSVL NLVIVRKGEK DIPGLTDSTV PRRLGPKRAS RIRKLFNLSK EDDVRQYVVR R PLTKEGKK ...String:
MKLNISFPAT GCQKLIEVDD ERKLRIFYEK RMATEVAADS LGDEWKGYVV RISGGNDKQG FPMKQGVLTH GRVRLLLSKG HSCYRPRRT GERKRKSVRG CIVDANLSVL NLVIVRKGEK DIPGLTDSTV PRRLGPKRAS RIRKLFNLSK EDDVRQYVVR R PLTKEGKK PRTKAPKIQR LVTPRVLQHK RRRIALKRQR TLKNKEAAAE YTKLLAKRMK EAKEKRQEQI AKRRRLSSLR AS TSKSESS QK

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Macromolecule #7: 40S ribosomal protein S7

MacromoleculeName: 40S ribosomal protein S7 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 22.293119 KDa
SequenceString: MFSTSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELHITAAKE IEVGGSRKAI IIFVPVPQLK SFQKIQVRLV RELEKKFSG KHVVFIAQRR ILPKPTRKSR TKNKQKRPRS RTLTNVHDAI LEDLVFPSEI VGKRIRVKLD SSRLIKVHLD K AQQNNVEH ...String:
MFSTSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELHITAAKE IEVGGSRKAI IIFVPVPQLK SFQKIQVRLV RELEKKFSG KHVVFIAQRR ILPKPTRKSR TKNKQKRPRS RTLTNVHDAI LEDLVFPSEI VGKRIRVKLD SSRLIKVHLD K AQQNNVEH KVETFAGVYK KLTGKDVIFE FPEFQL

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Macromolecule #8: 40S ribosomal protein S8

MacromoleculeName: 40S ribosomal protein S8 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 24.151434 KDa
SequenceString: MGISRDNWHK RRRTGGKRKP VHKKRKYELG RPAANTKIGP RRIHTIRVRG GNKKYRALRL DVGNFSWGSE CCTRKTRIID VVYNASNNE LVRTKTLVKN CVVLVDSTPY RQWYESHYAL PLGRKKGAKL TPEEEEILNK KRSKKVQKKF TLRRKTAKIS P LLEEQFLQ ...String:
MGISRDNWHK RRRTGGKRKP VHKKRKYELG RPAANTKIGP RRIHTIRVRG GNKKYRALRL DVGNFSWGSE CCTRKTRIID VVYNASNNE LVRTKTLVKN CVVLVDSTPY RQWYESHYAL PLGRKKGAKL TPEEEEILNK KRSKKVQKKF TLRRKTAKIS P LLEEQFLQ GKLLACISSR PGQCGRADGY VLEGKELEFY LRKIKAKKGK

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Macromolecule #9: 40S ribosomal protein S9

MacromoleculeName: 40S ribosomal protein S9 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 22.515379 KDa
SequenceString: MPVAKTWVCS KTYVTPRRPF EKSRLDQELR LIGEYGLRNK REVWRVKFTL AKIRKAAREL LTLDEKDPKR LFEGNALLRR LVRIGVLDE GKMKLDYILG LKVEDFLERR LQTQVFKLGL AKSIHHARVL IRQRHIRVRK QVVNIPSFVV RLDSQKHIDF S LRSPYGGG ...String:
MPVAKTWVCS KTYVTPRRPF EKSRLDQELR LIGEYGLRNK REVWRVKFTL AKIRKAAREL LTLDEKDPKR LFEGNALLRR LVRIGVLDE GKMKLDYILG LKVEDFLERR LQTQVFKLGL AKSIHHARVL IRQRHIRVRK QVVNIPSFVV RLDSQKHIDF S LRSPYGGG RPGRVKRKNA KKAQGGGGGG DDEEED

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Macromolecule #10: 40S ribosomal protein S11

MacromoleculeName: 40S ribosomal protein S11 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 18.444666 KDa
SequenceString:
MADTQNERAY QKQPTIFQNK KRVLAVEGSG KEKLPRYHRN VGLGFKTPRE AIDGTYIDKK CPFTGNVSIR GRILSGVVTK MKMQRTIVI RRDYLHYIRK YNRFEKRHKN MSVHLSPCFR DVTVGDIVTV GECRPLSKTV RFNVLKVTKA AGAKKQFQKF

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Macromolecule #11: 40S ribosomal protein S13

MacromoleculeName: 40S ribosomal protein S13 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.23134 KDa
SequenceString:
MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIFKL AKKGLTPSQI GVILRDSHGV AQVRFVTGNK ILRILKSKGL APDLPEDLY HLIKKAVAVR KHLERNRKDK DAKFRLILVE SRIHRLARYY KTRRVLAPNW KYESSTASAL VA

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Macromolecule #12: Ribosomal protein S14

MacromoleculeName: Ribosomal protein S14 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.274757 KDa
SequenceString:
MAPRKGKEKK EEQVISLGPQ VAEGENVFGV CHIFASFNDT FVHVTDLSGK ETICRVTGGM KVKADRDESS PYAAMLAAQD VAQKCKELG ITALHIKLRA TGGNRTKTPG PGAQSALRAL ARSGMKIGRI EDVTPIPSDS TRRKGGRRGR RL

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Macromolecule #13: 40S ribosomal protein S17

MacromoleculeName: 40S ribosomal protein S17 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.481043 KDa
SequenceString:
MGRVRTKTVK KAARVIIEKY YTRLGNDFHT NKRVCEEIAI IPSKKLRNKI AGYVTHLMKR IQRGPVRGIS IKLQEEERER RDNYVPEVS ALDQEIIEVD TDTKEMLKLL DFGSLSNLQV TQPPVGMNFK TPRGV

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Macromolecule #14: 40S ribosomal protein S21

MacromoleculeName: 40S ribosomal protein S21 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 8.915166 KDa
SequenceString:
MQNDAGEFVD LYVPRKCSAS NRIIGAKDHA SIQINIAEVD RVTGRFNGQF KTYAICGAIR RMGEADDSLL RLAKTDSIVA K

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Macromolecule #15: 40S ribosomal protein S15a

MacromoleculeName: 40S ribosomal protein S15a / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.865555 KDa
SequenceString:
MVRMNVLADA LKSINNAEKR GKRQVLLRPC SKVIVRFLTV MMKHGYIGEF EIIDDHRAGK IVVNLTGRLN KCGVISPRFD VQLKDLEKW QNNLLPSRQF GFIVLTTSAG IMDHEEARRK HTGGKILGFF F

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Macromolecule #16: 40S ribosomal protein S23

MacromoleculeName: 40S ribosomal protein S23 / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.885717 KDa
SequenceString:
MGKCRGLRTA RKLRNHRREQ KWHDKQYKKA HLGTALKANP FGGASHAKGI VLEKVGVEAK QPNSAIRKCV RVQLIKNGKK ITAFVPNDG CLNFIEENDE VLVAGFGRKG HAVGDIPGVR FKVVKVANVS LLALYKGKKE RPRS

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Macromolecule #17: 40S ribosomal protein S24

MacromoleculeName: 40S ribosomal protein S24 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.383306 KDa
SequenceString:
MNDTVTVRTR KFMTNRLLQR KQMIVDVLHP GKATVPKTEI REKLAKMYKT TPDVVFVFGF KTQFGGGKTT GFGMIYDSLD YAKKNEPKY RLQRHGLYEK KKTSRKQRKE RKNRMKKVRG IKKASVGASG KKK

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Macromolecule #18: 40S ribosomal protein S26

MacromoleculeName: 40S ribosomal protein S26 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 13.053496 KDa
SequenceString:
MTKKRRNNGR AKKGRGHVQP IRCTNCARCV PKDKAIKKFV IRNIVEAAAV RDISEASVFD SYVLPKLYVK LHYCVSCAIH SKVVRNRSR EARKDRTPPP RFRPTGGAPR APPKPM

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Macromolecule #19: 40S ribosomal protein S27

MacromoleculeName: 40S ribosomal protein S27 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 9.550239 KDa
SequenceString:
MPLAKDLLHP TPEEERRRHK KKRLVQSPNS YFMDVKCPGC YKITTVFSHA QTVVLCVGCS TVLCQPTGGK ARLTEGCSFR RKQH

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Macromolecule #20: 40S ribosomal protein S30

MacromoleculeName: 40S ribosomal protein S30 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.651978 KDa
SequenceString:
MQLFLRAQSL HTLEVSGNET VRDIKAHVEA LEGVCVEDQL LLLSGAPLQD DSTLLNCGIT EFCTLEVSGR LLGGKVHGSL ARAGKVRGQ TPKVDKQEKK KKKTGRAKRR IQYNRRFVNV VPTFGKKKGP NANS

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Macromolecule #21: DNA-(apurinic or apyrimidinic site) lyase

MacromoleculeName: DNA-(apurinic or apyrimidinic site) lyase / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO / EC number: DNA-(apurinic or apyrimidinic site) lyase
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 26.879502 KDa
SequenceString: MAVQISKKRK FVSDGIFKAE LNEFLTRELA EDGYSGVEVR VTPTRTEIII LATRTQNVLG EKGRRIRELT AVVQKRFGFP EGGVELYAE KVATRGLCAI AQAESLRYKL LGGLAVRRAC YGVLRFIMES GAKGCEVVVS GKLRGQRAKS MKFVDGLMIH S GDPVNYYV ...String:
MAVQISKKRK FVSDGIFKAE LNEFLTRELA EDGYSGVEVR VTPTRTEIII LATRTQNVLG EKGRRIRELT AVVQKRFGFP EGGVELYAE KVATRGLCAI AQAESLRYKL LGGLAVRRAC YGVLRFIMES GAKGCEVVVS GKLRGQRAKS MKFVDGLMIH S GDPVNYYV DTAVRHVLLR QGVLGIKVKI MLPWDPSGKI GPKKPLPDHV SIVEPKEEVL STTPVSEQKG AKPEVPVMPQ GT PVPTA

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Macromolecule #22: Ribosomal protein S5

MacromoleculeName: Ribosomal protein S5 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 22.9094 KDa
SequenceString: MAEDWEAAPA VAETPEIKLF GKWSTDDVQI NDISLQDYIA VKEKYAKYLP HSSGRYAAKR FRKAQCPIVE RVTNSMMMHG RNNGKKLLT VRIVKHAFEI IHLLTGENPL QILVNAIINS GPREDSTRIG RAGTVRRQAV DVSPLRRVNQ AIWLLCTGAR E AAFRNIKT ...String:
MAEDWEAAPA VAETPEIKLF GKWSTDDVQI NDISLQDYIA VKEKYAKYLP HSSGRYAAKR FRKAQCPIVE RVTNSMMMHG RNNGKKLLT VRIVKHAFEI IHLLTGENPL QILVNAIINS GPREDSTRIG RAGTVRRQAV DVSPLRRVNQ AIWLLCTGAR E AAFRNIKT IAECLADELI NAAKGSSNSY AIKKKDELER VAKSNR

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Macromolecule #23: Ribosomal protein S10

MacromoleculeName: Ribosomal protein S10 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 18.919795 KDa
SequenceString:
MLMPKKNRIA IYELLFKEGV MVAKKDVHLA KHPELADKNV PNLHVMKAMQ SLKSCGYVKE QFAWRHFYWY LTNEGIQYLR DFLHLPPEI VPATLRRQTR PETARPRPKG LEGERPARLA RGEGDRDAYR RSAAQPGADK KAEAGAGAAT EFQFRGGFGR G RGQQPQ

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Macromolecule #24: 40S ribosomal protein S15

MacromoleculeName: 40S ribosomal protein S15 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.040109 KDa
SequenceString:
MADTEQKKKR TFRKFTYRGV DLDQLLDMSY EQLMQLYSAR QRRRLNRGLR RKQQSLLKRL RKAKKEAPPM EKPEVVKTHL RDMVILPEM VGSMVGVYNG KTFNQVEIKP EMIGHYLGEF SITYKPVKHG RPGIGATHSS RFIPLK

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Macromolecule #25: Ribosomal protein S16

MacromoleculeName: Ribosomal protein S16 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.387312 KDa
SequenceString:
MPAKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPVTLQYK LLEPLLLLGK ERFAGVDIRV RVKGGGHVAQ VYAIRQAIS KALVAYYQKY VDEASKKEIK DILIQYDRTL LVADPRRCES KKFGGPGARA RYQKSYR

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Macromolecule #26: 40S ribosomal protein S20

MacromoleculeName: 40S ribosomal protein S20 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 13.315674 KDa
SequenceString:
MAFKDTGKAP VEAEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKSLKV KGPVRMPTKT LRITTRKTPC GEGSKTWDRF QMRIHKRLI DLHSPSEIVK QITSISIEPG VEVEVTIADA

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Macromolecule #27: 40S ribosomal protein S28

MacromoleculeName: 40S ribosomal protein S28 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 7.838026 KDa
SequenceString:
MDASRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDSNR SIIRNVKGPV REGDVLTLLE SEREARRLR

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Macromolecule #28: 40S ribosomal protein S29

MacromoleculeName: 40S ribosomal protein S29 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 6.692794 KDa
SequenceString:
MGHQQLYWSH PRKYGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI GFVKLD

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Macromolecule #29: Guanine nucleotide-binding protein subunit beta-2-like 1

MacromoleculeName: Guanine nucleotide-binding protein subunit beta-2-like 1
type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 35.161703 KDa
SequenceString: MTEQMTVRGT LKGHSGWVTQ IATTPQFPDM ILSASRDKTI IMWKLTRDET NYGIPQRALR GHSHFVSDVV ISSDGQFALS GSWDGTLRL WDLTTGTTTR RFVGHTKDVL SVAFSADNRQ IVSGSRDKTI KLWNTLGVCK YTIQDDSHTE WVSCVRFSPN S SNPIIVSC ...String:
MTEQMTVRGT LKGHSGWVTQ IATTPQFPDM ILSASRDKTI IMWKLTRDET NYGIPQRALR GHSHFVSDVV ISSDGQFALS GSWDGTLRL WDLTTGTTTR RFVGHTKDVL SVAFSADNRQ IVSGSRDKTI KLWNTLGVCK YTIQDDSHTE WVSCVRFSPN S SNPIIVSC GWDKMVKVWN LANCKLKTNH IGHTGYLNTV TVSPDGSLCA SGGKDGQAML WDLNEGKHLY TLDGGDTINA LC FSPNRYW LCAATGPSIK IWDLEGKIIV DELRQDIITT NSKAEPPQCT SLAWSADGQT LFAGYTDNLI RVWQVTIGTR

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Macromolecule #30: 40S ribosomal protein S25

MacromoleculeName: 40S ribosomal protein S25 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 13.894333 KDa
SequenceString:
MPPKDSKQKK DAGKSKKDKD PVNKSGGKAK KKKWSKGKVR DKLNNLVLFD KATYDKLYKE VPNYKLITPA VVSERLKIRG SLARAALQE LLGKGLIKLV SKHRAQVIYT RNTKGTDEAA PEKEA

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Macromolecule #31: 40S ribosomal protein S19

MacromoleculeName: 40S ribosomal protein S19 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.971671 KDa
SequenceString:
MPGGVTVKDV NQQEFVRALA AFLKKSGKLK VPDWVDIVKL AKHKELAPCD ENWFYIRAAS TVRHLYLRGG VGVGSMTKIY GGRKRNGVC PSHFSVGSKN VARKVLQALE GLKMVEKDPN GGRRLTPQGT RDLDRIAGQV AAASKKV

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Macromolecule #32: 40S ribosomal protein S18

MacromoleculeName: 40S ribosomal protein S18 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.772777 KDa
SequenceString:
MSLVIPEKFQ HILRVLNTNI DGRRKIAFAI TAIKGVGRRY AHVVLRKADI DLNKRAGELT EDEVERVVTI MQNPRQYKIP DWFLNRQKD IKDGKYSQVL ANGLDNKLRE DLERLKKIRA HRGLRHFWGL RVRGQHTKTT GRRGRTVGVS KKK

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Macromolecule #33: Zgc:103482

MacromoleculeName: Zgc:103482 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 38.616762 KDa
SequenceString: MKELVEEMPD EGYGCTVANR FGQLLGDESD PFDILYAAGT EKKQKKKKEE PKKTSTTTKS VKKESQRDRK TILPAGGGGQ VRPGHEVVE EPIQRRVTFD RKFNDAEKPP LSFSVERPVD VLDRPARGRG TGRGKGARGP GFPRSNDGFD QRGKREFERH S GSDRSSVR ...String:
MKELVEEMPD EGYGCTVANR FGQLLGDESD PFDILYAAGT EKKQKKKKEE PKKTSTTTKS VKKESQRDRK TILPAGGGGQ VRPGHEVVE EPIQRRVTFD RKFNDAEKPP LSFSVERPVD VLDRPARGRG TGRGKGARGP GFPRSNDGFD QRGKREFERH S GSDRSSVR SEEKRSGSGS RNWGSVRDHM SVIEVASPSE EVTENEETQE AVETDGENRP SETEEVIEVA MEMTLDEWKA LQ EQSRPKV ELNIRKTESS VPSKAVVIHK SKLLQKQDGM DEDVVFRRPA NDITCQLEFN FGSLDRPTRG GRGGRGGRGR GGP SMPTLR SPQKFDSAPN PDDPEDFPAL A

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Macromolecule #34: 60S ribosomal protein L27

MacromoleculeName: 60S ribosomal protein L27 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.819896 KDa
SequenceString:
MGKFMKPGKV VMVLAGRYAG RKAVIVKNID DGTADRPYSH ALVAGIDRYP RKVTATMGKK KIAKRSKIKA FVKVFNYNHL MPTRYSVDI PLDKTVVNKD VFRDPALKRK ARREAKVKFE ERYKTGKNKW FFQKLRF

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Macromolecule #35: 60S ribosomal protein L29

MacromoleculeName: 60S ribosomal protein L29 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 7.596919 KDa
SequenceString:
MAKSKNHTTH NQSRKWHRNG IKKPRSQRYE SLKGVDPKFL RNMRFAKKHN KKGAKTIARK EASK

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Macromolecule #36: 60S ribosomal protein L30

MacromoleculeName: 60S ribosomal protein L30 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 13.004215 KDa
SequenceString:
MVAAKKTKKS LESINSRLQL VMKSGKYVLG YKQSQKMIRQ GKAKLVILAN NCPALRKSEI EYYAMLAKTG VHHYSGNNIE LGTACGKYY RVCTLAIIDP GDSDIIRSMP DQQQGGEK

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Macromolecule #37: 60S ribosomal protein L31

MacromoleculeName: 60S ribosomal protein L31 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.369771 KDa
SequenceString:
MAPKKGEKKK GRSAINEVVT REYTINIHKR IHGISFKRRA PRALKEIRKF AVKEMGTPDV RIDTRLNKAV WAKGVRNVPY RMRVRLSRK RNEDEDSPNK LYTLVTYVPV TTYKGLQTVN VDEN

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Macromolecule #38: Ribosomal protein L32

MacromoleculeName: Ribosomal protein L32 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.851852 KDa
SequenceString:
MAALRPLTKP KIVKKRTKKF IRHQSDRYVK IRANWRKPRG IDNRVRRRFK GQMLMPNIGY GSNRKTKHML PSGFKKFLVH NVKELEVLM MSNKSHCAEI AHNVSSKNRK LIVERAAQLA IKVTNPNARL RSEENE

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Macromolecule #39: 60S ribosomal protein L35a

MacromoleculeName: 60S ribosomal protein L35a / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 12.50383 KDa
SequenceString:
MPGRLWSKAI FAGYKRGLRN QREHTALLKL EGVYNRGEVD FYLGKRCAYV YKAKKKTATP GGKPNKTRVI WGKVTRAHGN SGMVRAKFK SNLPAKAIGH RIRVMLYPSR V

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Macromolecule #40: 60S ribosomal protein L34

MacromoleculeName: 60S ribosomal protein L34 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 13.401077 KDa
SequenceString:
MVQRLTYRRR LSYNTASNKT RLSRTPGNRI VYLYTKKTGK SPKSACGICP GRLRGIRAVR PQVLMRLSKT KKHVSRAYGG SMCAKCVRD RIKRAFLIEE QKIVVKVLKA QAQTQKSK

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Macromolecule #41: 60S ribosomal protein L35

MacromoleculeName: 60S ribosomal protein L35 / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.47053 KDa
SequenceString:
MAKIKARDLR GKKKEELLKQ LDDLKVELSQ LRVAKVTGGA ASKLSKIRVV RKSIARVLTV INQTQKENLR KFYKGKKYKP LDLRPKKTR AIRRQLTKHE ENLMTKKMQR KSRLYSIRKF AVKA

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Macromolecule #42: 60S ribosomal protein L36

MacromoleculeName: 60S ribosomal protein L36 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 12.216753 KDa
SequenceString:
MVVRYPMAVG LNKGHKVTKN VSKPKHSRRR GRLTKHAKFA RDLIREVCGF APYERRAMEL LKVSKDKRAL KFIKKRVGTH IRAKRKREE LSNTLAAMRK AAAKKE

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Macromolecule #43: Ribosomal protein L37

MacromoleculeName: Ribosomal protein L37 / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 11.074016 KDa
SequenceString:
MTKGTSSFGK RRNKTHTLCR RCGSKAYHLQ KSTCGKCGYP AKRKRKYNWS AKAKRRSTTG TGRMRHMKVV FRRFRNGFRE GTVPKPRRA AVAASSSS

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Macromolecule #44: 60S ribosomal protein L38

MacromoleculeName: 60S ribosomal protein L38 / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 8.238948 KDa
SequenceString:
MPRKIEEIKD FLLTARRKDA KSVKIKKNKD NVKFKVRCSR YLYTLVITDK EKAEKLKQSL PPGLAVKELK

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Macromolecule #45: 60S ribosomal protein L36a

MacromoleculeName: 60S ribosomal protein L36a / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 12.565102 KDa
SequenceString:
MVNVPKTRRT YCKKCKKHQP HKVTQYKKGK DSLYAQGKRR YDRKQSGYGG QTKPIFRKKA KTTKKIVLRL ECVEPNCRSK RMLAIKRCK HFELGGDKKR KGQVIQF

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Macromolecule #46: Zgc:171772

MacromoleculeName: Zgc:171772 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 10.229295 KDa
SequenceString:
MAKRTKKVGI VGKYGTRYGA SLRKMVKKIE ISQHAKYTCS FCGKTKMKRK AVGIWHCGSC MKTVAGGAWS YNTTSAVTVK SAIKRLKEL KDQ

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Macromolecule #47: 60S ribosomal protein L8

MacromoleculeName: 60S ribosomal protein L8 / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 28.131973 KDa
SequenceString: MGRVIRGQRK GAGSVFKAHV KHRKGAAKLR HIDFAERHGY IKGIVKDIIH DPGRGAPLAK VMFRDPYRFK KRTELFIAAE GIHTGQFIY CGKKAQLNIG NVLPVGTMPE GTIVCCLEEK PGDRGKLARA SGNYATVISH NPETKKSRVK LPSGSKKVIS S ANRAVVGV ...String:
MGRVIRGQRK GAGSVFKAHV KHRKGAAKLR HIDFAERHGY IKGIVKDIIH DPGRGAPLAK VMFRDPYRFK KRTELFIAAE GIHTGQFIY CGKKAQLNIG NVLPVGTMPE GTIVCCLEEK PGDRGKLARA SGNYATVISH NPETKKSRVK LPSGSKKVIS S ANRAVVGV VAGGGRIDKP ILKAGRAYHK YKAKRNCWPR VRGVAMNPVE HPFGGGNHQH IGKPSTIRRD APAGRKVGLI AA RRTGRLR GTKTVQDKEN

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Macromolecule #48: Ribosomal protein L3

MacromoleculeName: Ribosomal protein L3 / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 46.358297 KDa
SequenceString: MSHRKFSAPR HGSLGFLPRK RCKRHRGKVK SFPKDDPSKP VHLTAFLGYK AGMTHIVREV DRPGSKVNKK EVVEAVTVVE TPPMIVVGV VGYVMTPRGL RSFKTIFAEH ISDECKRRFY KNWYKSKKKA FTKYCKRWQD EEGKKQLEKD FSSMKKYCQI I RIIAHTQM ...String:
MSHRKFSAPR HGSLGFLPRK RCKRHRGKVK SFPKDDPSKP VHLTAFLGYK AGMTHIVREV DRPGSKVNKK EVVEAVTVVE TPPMIVVGV VGYVMTPRGL RSFKTIFAEH ISDECKRRFY KNWYKSKKKA FTKYCKRWQD EEGKKQLEKD FSSMKKYCQI I RIIAHTQM RLLPHRQKKS HLMEIQLNGG TISDKVDWAR EKLEQSIPIA NVFSQDEMID VIGVTKGHGC KGVTSRWHTK KL PRKTHRG LRKVACIGAW HPARVAFSVA RAGQKGYHHR TEINKKIYKI GVGYHNKDGK LVKNNASTDY DLSNKSINPL GGF VHYGEV TNDFLMLKGC VVGTKKRVLT LRKSLLVQTS RRAQEKIDLK FIDTTSKFGH GRFQTIEEKK NFMGPLKKDR LAKE EMA

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Macromolecule #49: Ribosomal protein L4

MacromoleculeName: Ribosomal protein L4 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 42.644477 KDa
SequenceString: MACARPLISV YSEKGETSGK NVVMPAVFRA PIRPDIVNFV HTNMRKNKRQ PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQ GAFGNMCRGG RMFAPTKTWR RWHRRVNVNQ KRYAMCSALA ASALPSLVMA KGHRIEEIPE VPLVVDDKVE G YKKTKEAV ...String:
MACARPLISV YSEKGETSGK NVVMPAVFRA PIRPDIVNFV HTNMRKNKRQ PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQ GAFGNMCRGG RMFAPTKTWR RWHRRVNVNQ KRYAMCSALA ASALPSLVMA KGHRIEEIPE VPLVVDDKVE G YKKTKEAV LLLKKLKAWN DIKKVYASQR MRAGKGKMRN RRRIQRKGPC IIYNEDNGVT RAFRNIPGIT LQSVSRLDLL KL APGGHIG RFCIWTEGAF RKLDDLYGTW RKASTLKVDY NLPMHKMSIT DLNRIIKSEE VQKAIRPANR KINRRVFKKN PLK NLRVMM KLNPYAKTAR RRAIMAHNPD VKAKMLKPKK KRVVKKTKAK KAEATPAQA

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Macromolecule #50: Ribosomal protein L5b

MacromoleculeName: Ribosomal protein L5b / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 34.118434 KDa
SequenceString: MGFVKVVKNK SYFKRYQVKF RRRREGKTDY FARKRLVIQD KNKYNTPKYR MIVRFSNRDI VCQIAYAKIE GDMIVCAAYS HELPKYGIS VGLTNYAAAY CTGLLLARRL LNKFGLDKVY DGQVEITGDE FNVESIDGQP GAFTCYLDAG LARTTTGNKV F GALKGAVD ...String:
MGFVKVVKNK SYFKRYQVKF RRRREGKTDY FARKRLVIQD KNKYNTPKYR MIVRFSNRDI VCQIAYAKIE GDMIVCAAYS HELPKYGIS VGLTNYAAAY CTGLLLARRL LNKFGLDKVY DGQVEITGDE FNVESIDGQP GAFTCYLDAG LARTTTGNKV F GALKGAVD GGLSIPHSTK RFPGYDVESK EFNAEVHRKH ILGLNIAEYM RLLMEEDEEC YKKQFSRFIK NGVTADSMEE MY KKAHAAI RENPVHEKKP KREVKKKRWN RAKLTLAQRK DRVAQKKASF LRAQAAEED

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Macromolecule #51: 60S ribosomal protein L6

MacromoleculeName: 60S ribosomal protein L6 / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 30.61851 KDa
SequenceString: MAEGDKKKVA RKHGSRNPEL VRGIGRYSRS AMFARRAMYK RKTKAPVTKV EKKIKEKKVK QKSKNPTTAI KTVGGDKNGG TRVVKLRKM PRYYPTEDVR RKLRSHGIKA FSQHRRKLRK TITPGTVLIM LTGRHRGKRV VFLKQLDSGL LLVTGPLAIN R VPLRRAHQ ...String:
MAEGDKKKVA RKHGSRNPEL VRGIGRYSRS AMFARRAMYK RKTKAPVTKV EKKIKEKKVK QKSKNPTTAI KTVGGDKNGG TRVVKLRKM PRYYPTEDVR RKLRSHGIKA FSQHRRKLRK TITPGTVLIM LTGRHRGKRV VFLKQLDSGL LLVTGPLAIN R VPLRRAHQ KFCIATNTKV DISGMKIPRT LTDSYFKKKK LRKPKHQEGE IFDTEKEKYQ LTEQRKADQK AVDSQLLPLI KK VPQLRGY LRSMFSLSNG VYPHKLVF

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Macromolecule #52: Ribosomal protein L7

MacromoleculeName: Ribosomal protein L7 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 28.505924 KDa
SequenceString: MAGETKKKIP SVPESLLKRR QRFAAIRAVR LKKAKADKKA SKVTRKLIFK RAEAYHKEYK QLYRREIRMS RMARKAGNYY VPAEPKLAF VIRIRGINGV SPKVRKVLQL LRLRQIFNGV FVKLNKASIN MLRIAEPYIA WGYPNLKSVR ELIYKRGFGK I KKQRIALT ...String:
MAGETKKKIP SVPESLLKRR QRFAAIRAVR LKKAKADKKA SKVTRKLIFK RAEAYHKEYK QLYRREIRMS RMARKAGNYY VPAEPKLAF VIRIRGINGV SPKVRKVLQL LRLRQIFNGV FVKLNKASIN MLRIAEPYIA WGYPNLKSVR ELIYKRGFGK I KKQRIALT DNSLIEKTLG QCGIICIEDL IHEIYTVGKN FKAANNFLWP FKLSSPRGGM NKKTTHFVEG GDAGNREDQI NR LVRRMN

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Macromolecule #53: 60S ribosomal protein L7a

MacromoleculeName: 60S ribosomal protein L7a / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 30.07768 KDa
SequenceString: MPKGKKGKGK KVAPAPSVAK KHEVKKVVNP LFEKRPKNFG IGQDIQPKRD LTRFVKWPRY VRLQRQRAIL YKRLKVPPAI NQFTQALDR QTATQLFKLA HKYRPETKHE KKQRLLARAE QKAAGKGDTP TKRPPVLRAG VNTVTTLVES KKAQLVVIAH D VDPIELVV ...String:
MPKGKKGKGK KVAPAPSVAK KHEVKKVVNP LFEKRPKNFG IGQDIQPKRD LTRFVKWPRY VRLQRQRAIL YKRLKVPPAI NQFTQALDR QTATQLFKLA HKYRPETKHE KKQRLLARAE QKAAGKGDTP TKRPPVLRAG VNTVTTLVES KKAQLVVIAH D VDPIELVV FLPALCRKMG VPYCIVKGKA RLGRLVHRKT CTSIAFTQTN PEDKAALAKL VEAIKTNYND RYEEIRRHWG GN VLGPKST ARIAKLEKAK AKELATKLG

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Macromolecule #54: 60S ribosomal protein L9

MacromoleculeName: 60S ribosomal protein L9 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 21.689256 KDa
SequenceString: MKTILSNQTV DIPDNVTVSL KGRTVTVKGP RGVLRREFNH INLELSLLGK KQKKLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFR YKMRSVYAHF PINVVIQESG SLVEIRNFLG EKYIRRVRMR QGVACAVSAA QKDELVLEGN DIELVSNSAA L IQQATTVK ...String:
MKTILSNQTV DIPDNVTVSL KGRTVTVKGP RGVLRREFNH INLELSLLGK KQKKLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFR YKMRSVYAHF PINVVIQESG SLVEIRNFLG EKYIRRVRMR QGVACAVSAA QKDELVLEGN DIELVSNSAA L IQQATTVK NKDIRKFLDG IYVSEKGTVV EAES

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Macromolecule #55: 60S ribosomal protein L11

MacromoleculeName: 60S ribosomal protein L11 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 20.415695 KDa
SequenceString:
MADQSEKKEN PMRELRIRKL CLNICVGESG DRLTRAAKVL EQLTGQTPVF SKARYTVRSF GIRRNEKIAV HCTVRGAKAE EILEKGLKV REYELRKNNF SDTGNFGFGI QEHIDLGIKY DPSIGIYGLD FYVVLGRPGF SIADKKRKTG RIGAKHRIRK E EAMRWFQQ KYDGIILPGK

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Macromolecule #56: 60S ribosomal protein L13

MacromoleculeName: 60S ribosomal protein L13 / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 24.426879 KDa
SequenceString: MAPSRNGMIL NPHFHKDWQK RVRTWFNQPA RKIRRRKARQ AKARRIAPRP VSGPLRPVVR CPTIRYHTKV RAGRGFTLEE LKAAGINKK VARTIGISVD SRRRNRSTES LQANVQRLKE YRTKLIIFPR KAAKPKKGDS TEEELKMATQ LTGPVMPIKK V HKKEKARV ...String:
MAPSRNGMIL NPHFHKDWQK RVRTWFNQPA RKIRRRKARQ AKARRIAPRP VSGPLRPVVR CPTIRYHTKV RAGRGFTLEE LKAAGINKK VARTIGISVD SRRRNRSTES LQANVQRLKE YRTKLIIFPR KAAKPKKGDS TEEELKMATQ LTGPVMPIKK V HKKEKARV ISEDEKNFKA FASLRMARAN ARLFGIRAKR AKEAAEQDVE KKK

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Macromolecule #57: 60S ribosomal protein L14

MacromoleculeName: 60S ribosomal protein L14 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.166252 KDa
SequenceString:
MVFKRFVEIG RVAFIAFGPH EGKLVAIVDV IDQNRALVDG PCTGVKRQAL PFKCLQLTDY VIKVPHSARQ KYVRRAWEKA EISKKWEES SWAKKIEARK KRAAMSDFDR YKVSKAKKMR NKIIRHEMKK LQKAAAQKKA

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Macromolecule #58: Ribosomal protein L15

MacromoleculeName: Ribosomal protein L15 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 24.124232 KDa
SequenceString: MGAYKYMQEL WRKKQSDVMR FLLRVRCWQY RQLSSLHRAP RPTRPDKARR LGYKAKQGYV IYRIRVRRGG RKRPVPKGAT YGKPVHHGV NQIKFARSLQ SVAEERAGRH CGGLRVLNSY WVGEDSTYKF FEVILIDTFH KAIRRNPDTQ WITKAVHKHR E MRGLTSAG ...String:
MGAYKYMQEL WRKKQSDVMR FLLRVRCWQY RQLSSLHRAP RPTRPDKARR LGYKAKQGYV IYRIRVRRGG RKRPVPKGAT YGKPVHHGV NQIKFARSLQ SVAEERAGRH CGGLRVLNSY WVGEDSTYKF FEVILIDTFH KAIRRNPDTQ WITKAVHKHR E MRGLTSAG KKSRGLGKGH KFHLTIGGSR RAAWKRRNTL QLHRYR

+
Macromolecule #59: 60S ribosomal protein L13a

MacromoleculeName: 60S ribosomal protein L13a / type: protein_or_peptide / ID: 59 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 23.731516 KDa
SequenceString: MADRFNKVLI IDGRGHLLGR LSAIVAKQVL LGHKIVVVRC EGINISGNFY RNKLKYLAFL RKRMNTNPSR GPYHFRAPSR IFWRTVRGM LPHKTKRGQA ALDRLKVFDG IPPPYDKRKR MVVPAALKIV RLKPTRKFAL LGRLAHEVGW KYQAITATLE E KRKEKAKL ...String:
MADRFNKVLI IDGRGHLLGR LSAIVAKQVL LGHKIVVVRC EGINISGNFY RNKLKYLAFL RKRMNTNPSR GPYHFRAPSR IFWRTVRGM LPHKTKRGQA ALDRLKVFDG IPPPYDKRKR MVVPAALKIV RLKPTRKFAL LGRLAHEVGW KYQAITATLE E KRKEKAKL RYSKKKVEMK LTKQAEKNVE SKIAVYTDVL KKYGVLV

+
Macromolecule #60: 60S ribosomal protein L17

MacromoleculeName: 60S ribosomal protein L17 / type: protein_or_peptide / ID: 60 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 21.476158 KDa
SequenceString:
MVRYSLDPEN PTKSCKSRGS NLRVHFKNTR ETAQAIKGMH IRKANKYLKD VIVKHQCVPF RRYNGGVGRC AQAKQHDWTQ GRWPKKSAE FLLHMLKNAE SNAELKGLDV DSLVIEHIQV NKAPKMRRRT YRAHGRINPY MSSPCHIEMI LTEKEQIVPK P EEEVSQKK KVSQKKLKKQ KLMARE

+
Macromolecule #61: Ribosomal protein L18

MacromoleculeName: Ribosomal protein L18 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 21.04501 KDa
SequenceString:
MGVDIRHNKD RKVHRKEPKS QDIYLRLLVK LYRFLSRRSD APFNKVILRR LFMSKTNRPP LALSRLIRKM KLPGRENLTA VVVGTITDD VRIQNIPKLK VCALKVTDRA RSRILKAGGQ IMTFDQLALT SPRGRGTVLL SGPRKGRQVY RHFGKAPGTP H SHTKPYVR SKGRKFERAR GRRH

+
Macromolecule #62: 60S ribosomal protein L19

MacromoleculeName: 60S ribosomal protein L19 / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 23.522225 KDa
SequenceString: MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLVKDGLI IKKPVTVHSR ARCRKNTLAR RKGRHMGVGK RKGTANARM PEKLCWMRRM RILRRLLRRY REAKKIDRHM YHSLYLRAKG NVFKNKRILM EHIHKLKADK ARKKLLADQA E ARRTKTRE ...String:
MSMLRLQKRL ASSVLRCGKK KVWLDPNETN EIANANSRQQ IRKLVKDGLI IKKPVTVHSR ARCRKNTLAR RKGRHMGVGK RKGTANARM PEKLCWMRRM RILRRLLRRY REAKKIDRHM YHSLYLRAKG NVFKNKRILM EHIHKLKADK ARKKLLADQA E ARRTKTRE ARKRREERQQ AKKEEIIKTL SKEDETKK

+
Macromolecule #63: 60S ribosomal protein L21

MacromoleculeName: 60S ribosomal protein L21 / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 18.574945 KDa
SequenceString:
MTNTRGKRRG TRYMFARPFR KHGPIPLSTY MRIYKKGDIV DIKGTGTIQK GMPHKCYHGK TGRVYNVTQH AVGIIVNKQV KGKILAKRI NVRIEHIKHS KSRDSFLQRV KENEKKKVEA KKEGTWIELK RQPAAPRPAH FVSTKNNKPQ LLEPIPYEFM A

+
Macromolecule #64: Ribosomal protein L22

MacromoleculeName: Ribosomal protein L22 / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.316792 KDa
SequenceString:
MRFFSSSFLP KLSAMAPIKK QVTKGGKKKK QVLKFTLDCT HPVEDGIMDA ANFEQFLQER IKVNGKAGNL GGGVVSIERS KSKITVTSE VPFSKRYLKY LTKKYLKKNN LRDWLRVVAN TKESYELRYF QINQDEEEED ED

+
Macromolecule #65: 60S ribosomal protein L23

MacromoleculeName: 60S ribosomal protein L23 / type: protein_or_peptide / ID: 65 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.908505 KDa
SequenceString:
MSKRGRGGSS GAKFRISLGL PVGAVINCAD NTGAKNLYII SVKGIKGRLN RLPSAGVGDM VMATVKKGKP ELRKKVHPAV VIRQRKSYR RKDGVFLYFE DNAGVIVNNK GEMKGSAITG PVAKECADLW PRIASNAGSI A

+
Macromolecule #66: 60S ribosomal protein L24

MacromoleculeName: 60S ribosomal protein L24 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.929113 KDa
SequenceString:
MKVELCSFSG YKIYPGHGRR YARIDGKVFQ FLNAKCESAF LSKRNPRQIN WTVLYRRKHK KGQSEEVSKK RTRRAVKFQR AITGASLAE ILAKRNQKPE VRKAQREQAI RAAKEAKKAK QATKKQTTQS SKAPAKSAQK QKIAKPMKVS APRVGGKR

+
Macromolecule #67: Ribosomal protein L23a

MacromoleculeName: Ribosomal protein L23a / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.686102 KDa
SequenceString:
MAPKAKKEAV PAKTEAKSKA LKAKKAVLKG VHSQKKKKIR TTPTFHRPKT LRLRRQPKYP RKSAPRRNKL DHYAIIKFPL TTESAMKKI EDNNTLVFIV DVKANKHQIK HAVKKLYDID VAKVNTLIRP DGEKKAYVRL APDYDALDVA NKIGII

+
Macromolecule #68: ATPase H+ transporting V0 subunit e1

MacromoleculeName: ATPase H+ transporting V0 subunit e1 / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 17.387506 KDa
SequenceString:
MKLNTFVTSS RRKNRKRHFN APSHIRRKIM SSPLSKELRQ KYNVRSMPIR KDDEVQVVRG HYKGQQIGKV VQVYRKKYVI YIERVQREK ANGTTVHVGI HPSKVVITRL KLDKDRKKIL ERKAKSRQDI KEKGKYKEET IEKMQE

+
Macromolecule #69: Ribosomal protein L39

MacromoleculeName: Ribosomal protein L39 / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 6.410758 KDa
SequenceString:
MASHKTFRIK RFLAKKQKQN RPIPQWIRMK TGNKIRYNSK RRHWRRTKLG L

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Macromolecule #70: 60S ribosomal protein L41

MacromoleculeName: 60S ribosomal protein L41 / type: protein_or_peptide / ID: 70 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 3.473451 KDa
SequenceString:
MRAKWRKKRM RRLKRKRRKM RQRSK

+
Macromolecule #71: 60S ribosomal protein L28

MacromoleculeName: 60S ribosomal protein L28 / type: protein_or_peptide / ID: 71 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 15.661467 KDa
SequenceString:
MASPHLQWMV IRNSSSFLIK RNKQTYSTEP NNLKARNAFR FNGLIHRKTI GIEPAADGKG VVVVLKKRSG QRKPASSYGK ITINKNSRA TLASVRNIIR KNKYRRDLRM AALRRVSAIL SSQKPVVVRK KRSRAPKSS

+
Macromolecule #72: 60S ribosomal protein L10

MacromoleculeName: 60S ribosomal protein L10 / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 24.664143 KDa
SequenceString: MGRRPARCYR YCKNKPYPKS RFCRGVPDPK IRIFDLGRKK AKVDEFPLCA HMVSDEYEQL SSEALEAARI CANKYMVKTC GKDGFHIRV RLHPFHVIRI NKMLSCAGAD RLQTGMRGAF GKPQGTVARV HIGQVIMSVR TKAQNKEHVI EALRRAKFKF P GRQKIHVS ...String:
MGRRPARCYR YCKNKPYPKS RFCRGVPDPK IRIFDLGRKK AKVDEFPLCA HMVSDEYEQL SSEALEAARI CANKYMVKTC GKDGFHIRV RLHPFHVIRI NKMLSCAGAD RLQTGMRGAF GKPQGTVARV HIGQVIMSVR TKAQNKEHVI EALRRAKFKF P GRQKIHVS KKYGFTKFNT CDFDNMLAEK RLIPDGCGVK YIPSRGPLSR WKALHAN

+
Macromolecule #73: 60S ribosomal protein L18a

MacromoleculeName: 60S ribosomal protein L18a / type: protein_or_peptide / ID: 73 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 20.725533 KDa
SequenceString:
MKASGTLREY KVVGRLLPSV KNPAPPLYRM RIFAPNHVVA KSRFWYFVSQ LRKMKKASGE IVYCGLVFEK SPLKVKNFGI WLRYDSRSG THNMYREYRD LTTSGAVTQC YRDMGARHRA RAHAIQIMKV QVIAANKCRR PAIKQFHDSK IKFPLPHRVL R RQHKPRFT TKRPNTFF

+
Macromolecule #74: 60S ribosomal protein L40

MacromoleculeName: 60S ribosomal protein L40 / type: protein_or_peptide / ID: 74 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 14.786446 KDa
SequenceString:
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN IQKESTLHLV LRLRGGIIEP SLRQLAQKY NCEKMICRKC YARLHPRAVN CRKKKCGHTN NLRPKKKLK

+
Macromolecule #75: 60S ribosomal protein L27a

MacromoleculeName: 60S ribosomal protein L27a / type: protein_or_peptide / ID: 75 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.62149 KDa
SequenceString:
MPTKKSKTRK LRGHVSHGHG RVGKHRKHPG GRGNAGGLHH HRINFDKYHP GYFGKVGMRH YHLKRNTTFC PTINLDKLWT LVSEQTRVN YSQKPDGPAP IIDVVRAGYF KVLGKGKLPK QPVIVKAKFF SRRAEEKIKG VGGACVLTA

+
Macromolecule #79: Novel protein similar to human proliferation-associated 2G4 prote...

MacromoleculeName: Novel protein similar to human proliferation-associated 2G4 protein (PA2G4)
type: protein_or_peptide / ID: 79 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 43.391629 KDa
SequenceString: MSDDEQQEQT IAEDLVVTKY KMGGDIANQA LRAVIEAAKP GVSVLSLCQK GDAFIMAETG KIFKREKDMK KGIAFPTCVS VNNCVCHFS PLKSDPDYML KDGDLVKIDL GVHVDGFISN VAHSFVIGAT KEAPVTGRKA DVIKAAHLCA EAALRLVKPG N QNTQVTEA ...String:
MSDDEQQEQT IAEDLVVTKY KMGGDIANQA LRAVIEAAKP GVSVLSLCQK GDAFIMAETG KIFKREKDMK KGIAFPTCVS VNNCVCHFS PLKSDPDYML KDGDLVKIDL GVHVDGFISN VAHSFVIGAT KEAPVTGRKA DVIKAAHLCA EAALRLVKPG N QNTQVTEA WNKIAHSFKC NPIEGMLSHQ LKQHVIDGEK TIIQNPTDQQ KKDHEKAEFE VHEVYAVDVL ISSGEGKARD GG QRTTIYK RDPSKQYGLK MKTSRMFFSE VERRFDAMPF TLRAFEDEGK ARLGVVECAK HELLQPFSVL NEKEGEFVAQ FKF TVLLMA NGPLRITSGP LEAELYKSEH DVQDPELKSL IQSSASRKAQ KKKKKKASKT AETATGQPAE NEVAAK

+
Macromolecule #80: Eukaryotic translation elongation factor 2

MacromoleculeName: Eukaryotic translation elongation factor 2 / type: protein_or_peptide / ID: 80 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 95.623453 KDa
SequenceString: MVNFTVDQIR AIMDKKSNIR NMSVIAHVDH GKSTLTDSLV SKAGIIASAR AGETRFTDTR KDEQERCITI KSTAISMYYE LTENDLAFI KQCKDGSGFL INLIDSPGHV DFSSEVTAAL RVTDGALVVV DCVSGVCVQT ETVLRQAIAE RIKPVLMMNK M DRALLELQ ...String:
MVNFTVDQIR AIMDKKSNIR NMSVIAHVDH GKSTLTDSLV SKAGIIASAR AGETRFTDTR KDEQERCITI KSTAISMYYE LTENDLAFI KQCKDGSGFL INLIDSPGHV DFSSEVTAAL RVTDGALVVV DCVSGVCVQT ETVLRQAIAE RIKPVLMMNK M DRALLELQ LEPEELYQTF QRIVENVNVI ISTYGEDEGG PMGNIMIDPV IGTVGFGSGL HGWAFTLKQF AEMYVAKFAS KG EAQLSPA DRCKKVEDMM KKLWGDRYFD PAGGKFTKTA NGPDGKKYPR TFAQLILDPI FKVFDAIMNF KKEETAKLIE KLD IKLDTE DKDKEGKPLL KAVMRRWLPA GEALLQMITI HLPSPVTAQK YRCELLYEGP GDDEAAMGIK NCDPKGPLMM YISK MVPTT DKGRFYAFGR VFSGVVSTGL KVRIMGPNYT PGKKEDLYLK PIQRTILMMG RYVEPIEDVP CGNIVGLVGV DQFLV KTGT ITTFDQAHNM RVMKFSVSPV VRVAVEAKNP ADLPKLVEGL KRLAKSDPMV QCIIEESGEH IIAGAGELHL EICLKD LEE DHACIPLKKS DPVVSYRETV SAESDQMCLS KSPNKHNRLY MKARPFPDGL AEDIDKGDVS SRQELKTRAR YLADKYE WE VTEARKIWCF GPDGTGPNML VDVTKGVQYL NEIKDSVVAG FQWATKEGAL CEENMRAVRF DIHDVTLHTD AIHRGGGQ I IPTARRVLYA CQLTAEPRLM EPIYLVEIQC PEQVVGGIYG VLNRKRGHVF EESQVMGTPM FVVKAYLPVN ESFGFTADL RSNTGGQAFP QCVFDHWQIL PGDPKDAASK PCQIVADTRK RKGLKEGIPA LDNFLDKL

+
Macromolecule #81: Eukaryotic translation initiation factor 5A

MacromoleculeName: Eukaryotic translation initiation factor 5A / type: protein_or_peptide / ID: 81 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 16.987439 KDa
SequenceString:
MADPDLDFAS GDAGASATYP MQCSALRKNG FVVLKGRPCK IVEMSTSKTG (5CT)HGHAKVHLV GIDIFTNKKY EDICPS THN MDVPNIKRND YQLVDISEGF LSLMMDNGDV REDLRVPDGD LGKEIENKFA AGEEMLVTVL SAMGEESAVA LKPMTK

+
Macromolecule #82: Dap1b

MacromoleculeName: Dap1b / type: protein_or_peptide / ID: 82 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Zebrafish, Brachydanio rerio
Molecular weightTheoretical: 12.12815 KDa
SequenceString:
MVQLSKTGVR DTLKAGHPPA VKAGGKRVVK KSADENANVE KETRKTDKPR SVLAPSRMQH LSLLLSGPLE KLGHDFPETP VSVRHSRVR PSVEKPHISR IPCIQQPRKF

+
Macromolecule #83: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 83 / Number of copies: 7 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #84: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 84 / Number of copies: 202 / Formula: MG
Molecular weightTheoretical: 24.305 Da

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 7.6
Component:
ConcentrationFormulaName
20.0 mMHEPESHEPES
100.0 mMKClpotassium chloride
5.0 mMMg(OAc)2magnesium acetate
10.0 mMNH4Clammonium chloride
1.0 mMDTTdithiothreitol
GridModel: Quantifoil R3.5/1 / Material: COPPER / Mesh: 200 / Support film - Material: CARBON / Support film - topology: CONTINUOUS / Support film - Film thickness: 2.0 nm / Pretreatment - Type: GLOW DISCHARGE / Pretreatment - Time: 60 sec. / Pretreatment - Atmosphere: AIR
VitrificationCryogen name: ETHANE / Chamber humidity: 70 % / Instrument: LEICA EM GP

-
Electron microscopy

MicroscopeFEI TITAN KRIOS
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELDBright-field microscopy / Cs: 2.7 mm
Sample stageSpecimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER
Image recordingFilm or detector model: FEI FALCON III (4k x 4k) / Detector mode: INTEGRATING / Average electron dose: 43.0 e/Å2
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

-
Image processing

Particle selectionNumber selected: 1961364
Initial angle assignmentType: MAXIMUM LIKELIHOOD / Software - Name: cryoSPARC
Final 3D classificationNumber classes: 3 / Software - Name: cryoSPARC
Final angle assignmentType: MAXIMUM LIKELIHOOD / Software - Name: cryoSPARC
Final reconstructionApplied symmetry - Point group: C1 (asymmetric) / Resolution.type: BY AUTHOR / Resolution: 3.2 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: cryoSPARC (ver. 2.14) / Number images used: 535633

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Atomic model buiding 1

RefinementProtocol: OTHER
Output model

PDB-7oya:
Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome

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