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データを開く
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基本情報
登録情報 | データベース: SASBDB / ID: SASDCQ2 |
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![]() | 4Ca2+-calmodulin - Xenopus laevis
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機能・相同性 | ![]() |
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![]() | ![]() タイトル: 2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update. 著者: Jill Trewhella / Anthony P Duff / Dominique Durand / Frank Gabel / J Mitchell Guss / Wayne A Hendrickson / Greg L Hura / David A Jacques / Nigel M Kirby / Ann H Kwan / Javier Pérez / Lois ...著者: Jill Trewhella / Anthony P Duff / Dominique Durand / Frank Gabel / J Mitchell Guss / Wayne A Hendrickson / Greg L Hura / David A Jacques / Nigel M Kirby / Ann H Kwan / Javier Pérez / Lois Pollack / Timothy M Ryan / Andrej Sali / Dina Schneidman-Duhovny / Torsten Schwede / Dmitri I Svergun / Masaaki Sugiyama / John A Tainer / Patrice Vachette / John Westbrook / Andrew E Whitten / ![]() ![]() ![]() ![]() ![]() ![]() ![]() 要旨: In 2012, preliminary guidelines were published addressing sample quality, data acquisition and reduction, presentation of scattering data and validation, and modelling for biomolecular small-angle ...In 2012, preliminary guidelines were published addressing sample quality, data acquisition and reduction, presentation of scattering data and validation, and modelling for biomolecular small-angle scattering (SAS) experiments. Biomolecular SAS has since continued to grow and authors have increasingly adopted the preliminary guidelines. In parallel, integrative/hybrid determination of biomolecular structures is a rapidly growing field that is expanding the scope of structural biology. For SAS to contribute maximally to this field, it is essential to ensure open access to the information required for evaluation of the quality of SAS samples and data, as well as the validity of SAS-based structural models. To this end, the preliminary guidelines for data presentation in a publication are reviewed and updated, and the deposition of data and associated models in a public archive is recommended. These guidelines and recommendations have been prepared in consultation with the members of the International Union of Crystallography (IUCr) Small-Angle Scattering and Journals Commissions, the Worldwide Protein Data Bank (wwPDB) Small-Angle Scattering Validation Task Force and additional experts in the field. |
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構造の表示
構造ビューア | 分子: ![]() ![]() |
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ダウンロードとリンク
-モデル
モデル #1176 | ![]() タイプ: dummy / ソフトウェア: (on-line) / ダミー原子の半径: 1.80 A / 対称性: P1 / カイ2乗値: 0.844 / P-value: 0.532600 ![]() |
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モデル #1177 | ![]() タイプ: atomic / ソフトウェア: (on-line) / ダミー原子の半径: 1.90 A / 対称性: P1 コメント: Representative model from 1-state ensemble calculation, flexible residues 77-81 カイ2乗値: 0.840129176626 / P-value: 0.314400 ![]() |
モデル #1178 | ![]() タイプ: atomic / ソフトウェア: (on-line) / ダミー原子の半径: 1.90 A / 対称性: P1 コメント: Representative model-0 from 2-state ensemble, flexible residues 77-81 カイ2乗値: 0.790816234359 / P-value: 0.787700 ![]() |
モデル #1179 | ![]() タイプ: atomic / ソフトウェア: (on-line) / ダミー原子の半径: 1.90 A / 対称性: P1 コメント: Representative model-1 from 2-state ensemble, flexible residues 77-81 カイ2乗値: 0.790816234359 / P-value: 0.787700 ![]() |
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試料
![]() | 名称: 4Ca2+-calmodulin - Xenopus laevis / 試料濃度: 0.74-1.10 |
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バッファ | 名称: 25 mM MOPS, 250 mM NaCl, 50 mM KCl, 2 mM TCEP, 0.1% NaN3 pH: 7.5 コメント: 2 mM TCEP and 0.1% (.01538 M) NaN3 used for radiation protection |
要素 #614 | 名称: CaM / タイプ: protein / 記述: Calmodulin / 分子量: 16.706 / 分子数: 1 / 由来: Xenopus laevis / 参照: UniProt: P62155 配列: ADQLTEEQIA EFKEAFSLFD KDGDGTITTK ELGTVMRSLG QNPTEAELQD MINEVDADGN GTIDFPEFLT MMARKMKDTD SEEEIREAFR VFDKDGNGYI SAAELRHVMT NLGEKLTDEE VDEMIREADI DGDGQVNYEE FVQMMTAK |
-実験情報
ビーム | 設備名称: Australian Synchrotron SAXS/WAXS / 地域: Melbourne / 国: Australia ![]() | ||||||||||||||||||||||||||||||||||||
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検出器 | 名称: Pilatus 1M / タイプ: Dectris / Pixsize x: 172 mm | ||||||||||||||||||||||||||||||||||||
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