Entry Database : PDB / ID : 6r9h Structure visualization Downloads & linksTitle Crystal structure of the PDZ tandem of syntenin in complex with fragment C58 ComponentsSyntenin-1 Details Keywords SIGNALING PROTEIN / signaling protein cell adhesion PDZ domain syntenin syndecan drug designFunction / homology Function and homology informationFunction Domain/homology Component
interleukin-5 receptor complex / interleukin-5 receptor binding / positive regulation of extracellular exosome assembly / syndecan binding / Neurofascin interactions / presynapse assembly / neurexin family protein binding / cytoskeletal anchor activity / substrate-dependent cell migration, cell extension / positive regulation of exosomal secretion ... interleukin-5 receptor complex / interleukin-5 receptor binding / positive regulation of extracellular exosome assembly / syndecan binding / Neurofascin interactions / presynapse assembly / neurexin family protein binding / cytoskeletal anchor activity / substrate-dependent cell migration, cell extension / positive regulation of exosomal secretion / frizzled binding / negative regulation of receptor internalization / protein targeting to membrane / Ephrin signaling / RIPK1-mediated regulated necrosis / positive regulation of transforming growth factor beta receptor signaling pathway / growth factor binding / positive regulation of epithelial to mesenchymal transition / positive regulation of phosphorylation / cell adhesion molecule binding / protein sequestering activity / regulation of mitotic cell cycle / phosphatidylinositol-4,5-bisphosphate binding / ephrin receptor binding / adherens junction / positive regulation of JNK cascade / ionotropic glutamate receptor binding / Regulation of necroptotic cell death / azurophil granule lumen / extracellular vesicle / melanosome / presynapse / actin cytoskeleton organization / positive regulation of cell growth / chemical synaptic transmission / nuclear membrane / Ras protein signal transduction / cytoskeleton / blood microparticle / intracellular signal transduction / positive regulation of cell migration / membrane raft / protein heterodimerization activity / focal adhesion / positive regulation of cell population proliferation / Neutrophil degranulation / protein-containing complex binding / endoplasmic reticulum membrane / negative regulation of transcription by RNA polymerase II / extracellular space / extracellular exosome / extracellular region / nucleoplasm / membrane / identical protein binding / nucleus / plasma membrane / cytoplasm / cytosol Similarity search - FunctionBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2 Å DetailsAuthors Feracci, M. / Barral, K. Funding support Belgium, France, 7items Details Hide detailsOrganization Grant number Country KU Leuven GOA/12/016 Belgium French National Research Agency AMIDEX project ANR-11-IDEX-0001-02 France Belgian Foundation against Cancer STK-FAF-FA/2016/828 Belgium Fondation ARC ARC PDF20151203700 France Fondation ARC PJA 2016204584 France Research Foundation - Flanders FWO, G.0C57.18N Belgium Other private National League Against Cancer France
CitationJournal : J Extracell Vesicles / Year : 2020Title : Pharmacological inhibition of syntenin PDZ2 domain impairs breast cancer cell activities and exosome loadifing with syndecan and EpCAM cargo.Authors: Leblanc, R. / Kashyap, R. / Barral, K. / Egea-Jimenez, A.L. / Kovalskyy, D. / Feracci, M. / Garcia, M. / Derviaux, C. / Betzi, S. / Ghossoub, R. / Platonov, M. / Roche, P. / Morelli, X. / ... Authors : Leblanc, R. / Kashyap, R. / Barral, K. / Egea-Jimenez, A.L. / Kovalskyy, D. / Feracci, M. / Garcia, M. / Derviaux, C. / Betzi, S. / Ghossoub, R. / Platonov, M. / Roche, P. / Morelli, X. / Hoffer, L. / Zimmermann, P. History Deposition Apr 3, 2019 Deposition site : PDBE / Processing site : PDBERevision 1.0 Feb 3, 2021 Provider : repository / Type : Initial releaseRevision 1.1 Jan 24, 2024 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / citation / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim Item : _citation.country / _database_2.pdbx_DOI ... _citation.country / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
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