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Structure paper

TitleStructural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Journal, issue, pagesMbio, Vol. 11, Year 2020
Publish dateFeb 26, 2020 (structure data deposition date)
AuthorsStroh, L.J. / Rustmeier, N.H. / Blaum, B.S. / Botsch, J. / Rossler, P. / Wedekink, F. / Lipkin, W.I. / Mishra, N. / Stehle, T.
External linksMbio / PubMed:32723915
MethodsX-ray diffraction
Resolution1.45 - 2.65 Å
Structure data

PDB-6y5x:
Structure of apo New Jersey Polyomavirus VP1
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-6y5y:
Structure of New Jersey Polyomavirus VP1 in complex with 3'-Sialyllactose
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-6y5z:
Structure of apo Human Polyomavirus 12 VP1
Method: X-RAY DIFFRACTION / Resolution: 1.549 Å

PDB-6y60:
Structure of Human Polyomavirus 12 VP1 in complex with 3'-Sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 1.798 Å

PDB-6y61:
Structure of apo Sheep Polyomavirus VP1
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-6y63:
Structure of Sheep Polyomavirus VP1 in complex with 3'-Sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 1.651 Å

PDB-6y64:
Structure of Sheep Polyomavirus VP1 in complex with 6'-Sialyllactosamine
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-6y65:
Structure of apo Goose Hemorrhagic Polyomavirus VP1
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-6y66:
Structure of Goose Hemorrhagic Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-6y67:
Structure of apo Finch Polyomavirus VP1
Method: X-RAY DIFFRACTION / Resolution: 2.618 Å

PDB-6y6a:
Structure of Finch Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-6y9i:
Structure of apo Chimpanzee Polyomavirus VP1
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-SIA:
N-acetyl-alpha-neuraminic acid

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-IMD:
IMIDAZOLE

ChemComp-CL:
Unknown entry

ChemComp-MNA:
2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid

Source
  • new jersey polyomavirus-2013
  • human polyomavirus 12
  • sheep polyomavirus 1
  • goose hemorrhagic polyomavirus
  • finch polyomavirus
  • chimpanzee polyomavirus bob
KeywordsVIRAL PROTEIN / Major Capsid Protein / Polyomavirus

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