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Structure paper

TitleComprehensive Analysis of Binding Sites in Tubulin.
Journal, issue, pagesAngew. Chem. Int. Ed. Engl., Vol. 60, Page 13331-13342, Year 2021
Publish dateNov 8, 2020 (structure data deposition date)
AuthorsMuhlethaler, T. / Gioia, D. / Prota, A.E. / Sharpe, M.E. / Cavalli, A. / Steinmetz, M.O.
External linksAngew. Chem. Int. Ed. Engl. / PubMed:33951246
MethodsX-ray diffraction
Resolution1.9 - 3.1 Å
Structure data

PDB-5s4l:
Tubulin-Z1891773393-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s4m:
Tubulin-Z2142244288-complex
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-5s4n:
Tubulin-Z285782452-complex
Method: X-RAY DIFFRACTION / Resolution: 2.53 Å

PDB-5s4o:
Tubulin-Z48847594-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s4p:
Tubulin-Z275165822-complex
Method: X-RAY DIFFRACTION / Resolution: 2.29 Å

PDB-5s4q:
Tubulin-Z422344882-complex
Method: X-RAY DIFFRACTION / Resolution: 2.59 Å

PDB-5s4r:
Tubulin-Z117233350-complex
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-5s4s:
Tubulin-Z240297434-complex
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-5s4t:
Tubulin-Z328695024-complex
Method: X-RAY DIFFRACTION / Resolution: 2.27 Å

PDB-5s4u:
Tubulin-Z30620520-complex
Method: X-RAY DIFFRACTION / Resolution: 2.39 Å

PDB-5s4v:
Tubulin-Z57040482-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s4w:
Tubulin-Z1416571195-complex
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-5s4x:
Tubulin-Z2856434917-complex
Method: X-RAY DIFFRACTION / Resolution: 2.53 Å

PDB-5s4y:
Tubulin-Z2856434857-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s4z:
Tubulin-Z28290384-complex
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5s50:
Tubulin-Z57299526-complex
Method: X-RAY DIFFRACTION / Resolution: 3.1 Å

PDB-5s51:
Tubulin-Z1251207602-complex
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5s52:
Tubulin-Z50145861-complex
Method: X-RAY DIFFRACTION / Resolution: 2.83 Å

PDB-5s53:
Tubulin-Z1349163663-complex
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

PDB-5s54:
Tubulin-Z2856434816-complex
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5s55:
Tubulin-Z106307058-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s56:
Tubulin-Z2856434783-complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-5s57:
Tubulin-Z2856434883-complex
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-5s58:
Tubulin-Z2856434826-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s59:
Tubulin-Z1324080698-complex
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-5s5a:
Tubulin-Z1449748885-complex
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-5s5b:
Tubulin-Z906021418-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s5c:
Tubulin-Z44592329-complex
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5s5d:
Tubulin-Z32400357-complex
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-5s5e:
Tubulin-Z1515654336-complex
Method: X-RAY DIFFRACTION / Resolution: 2.67 Å

PDB-5s5f:
Tubulin-Z87615031-complex
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-5s5g:
Tubulin-Z1129283193-complex
Method: X-RAY DIFFRACTION / Resolution: 2.69 Å

PDB-5s5h:
Tubulin-Z2074076908-complex
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-5s5i:
Tubulin-Z295848548-complex
Method: X-RAY DIFFRACTION / Resolution: 2.49 Å

PDB-5s5j:
Tubulin-Z1148747945-complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-5s5k:
Tubulin-Z2472938267-complex
Method: X-RAY DIFFRACTION / Resolution: 2.41 Å

PDB-5s5l:
Tubulin-Z1492796719-complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-5s5m:
Tubulin-Z45527714-complex
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-5s5n:
Tubulin-Z165170770-complex
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

PDB-5s5o:
Tubulin-Z27682767-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s5p:
Tubulin-Z53825177-complex
Method: X-RAY DIFFRACTION / Resolution: 2.79 Å

PDB-5s5q:
Tubulin-Z396380540-complex
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-5s5r:
Tubulin-Z33452106-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s5s:
Tubulin-Z166605480-complex
Method: X-RAY DIFFRACTION / Resolution: 2.36 Å

PDB-5s5t:
Tubulin-Z198194394-complex
Method: X-RAY DIFFRACTION / Resolution: 2.53 Å

PDB-5s5u:
Tubulin-Z1124201124-complex
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-5s5v:
Tubulin-Z32386228-complex
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-5s5w:
Tubulin-Z53860899-complex
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-5s5x:
Tubulin-Z45705015-complex
Method: X-RAY DIFFRACTION / Resolution: 2.32 Å

PDB-5s5y:
Tubulin-Z26781952-complex
Method: X-RAY DIFFRACTION / Resolution: 2.26 Å

PDB-5s5z:
Tubulin-Z2856434944-complex
Method: X-RAY DIFFRACTION / Resolution: 2.55 Å

PDB-5s60:
Tubulin-Z27695365-complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-5s61:
Tubulin-Z57472297-complex
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-5s62:
Tubulin-Z100642432-complex
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

PDB-5s63:
Tubulin-Z2241115980-complex
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-5s64:
Tubulin-Z28870646-complex
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

PDB-5s65:
Tubulin-Z1354416068-complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-5s66:
Tubulin-Z2856434929-complex
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5s67:
Tubulin-Z1896597864-complex
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-WV1:
N-{4-[(1R)-1-aminoethyl]phenyl}cyclopropanecarboxamide

ChemComp-ACP:
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER / AMP-PCP, energy-carrying molecule analogue*YM

ChemComp-HOH:
WATER

ChemComp-WV4:
N-ethyl-2-fluoro-4-(methylsulfonyl)aniline

ChemComp-UVA:
N-methyl-2-(methylsulfonyl)aniline

ChemComp-O0J:
N-[4-(2-amino-1,3-thiazol-4-yl)phenyl]acetamide

ChemComp-WNY:
1-[4-(4-chlorophenyl)piperazin-1-yl]ethan-1-one

ChemComp-WVD:
4-(4-methyl-1,3-thiazole-5-carbonyl)piperazin-2-one

ChemComp-NW7:
3-ethyl-5-methyl-N-(5-methyl-1,2-oxazol-3-yl)-1,2-oxazole-4-carboxamide

ChemComp-K0M:
3-methyl-N-(1-methyl-1H-pyrazol-3-yl)-1,2-oxazole-5-carboxamide

ChemComp-K1G:
N,1-dimethyl-N-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine

ChemComp-GX4:
cyclopropyl-[4-(4-fluorophenyl)piperazin-1-yl]methanone

ChemComp-9KS:
N-(2-hydroxyphenyl)acetamide

ChemComp-WZ7:
2-[(cyclopent-3-en-1-yl)amino]pyridine-4-carboxamide

ChemComp-JHD:
1-(3,4-dimethoxyphenyl)methanamine

ChemComp-NSJ:
3-[(thiomorpholin-4-yl)methyl]phenol

ChemComp-WN1:
N-(2-fluorophenyl)-3-methoxybenzamide

ChemComp-WZD:
N-[(furan-2-yl)methyl]-1H-benzimidazol-2-amine

ChemComp-RWS:
1-(5-methyl-1,3,4-thiadiazol-2-yl)piperidine

ChemComp-W1P:
5-methyl-2-phenyl-2,4-dihydro-3H-pyrazol-3-one / medication*YM

ChemComp-WZM:
6-[cyclobutyl(methyl)amino]pyridazine-3-carboxamide

ChemComp-WLS:
1-(pyridin-4-yl)-N-[(thiophen-2-yl)methyl]methanamine

ChemComp-WZP:
2-methyl-1-[4-(propan-2-yl)piperazin-1-yl]propan-1-one

ChemComp-O3G:
N-benzyl-1-(4-fluorophenyl)methanamine

ChemComp-WZS:
1-{4-[(2-phenylethyl)amino]piperidin-1-yl}ethan-1-one

ChemComp-NUY:
[4-(propan-2-yl)piperazin-1-yl](thiophen-2-yl)methanone

ChemComp-UR1:
3-fluoro-5-methylbenzene-1-sulfonamide

ChemComp-WZY:
N-(4-methoxyphenyl)glycinamide

ChemComp-K2G:
5-chloro-2-(propan-2-yl)pyrimidine-4-carboxamide

ChemComp-K0G:
N-phenyl-N'-pyridin-3-ylurea

ChemComp-NZJ:
1-(3-methylbenzene-1-carbonyl)piperidine-4-carboxamide

ChemComp-UQJ:
3-(difluoromethyl)-1-methyl-1H-pyrazole-4-carboxamide

ChemComp-UQM:
N-[4-(2-amino-2-oxoethyl)phenyl]acetamide

ChemComp-SZY:
N-(4-methylpyridin-3-yl)acetamide

ChemComp-WLG:
1-(5-azaspiro[2.5]octan-5-yl)-2-(difluoromethoxy)ethan-1-one

ChemComp-X0G:
4-[(3-cyclopropyl-1,2,4-oxadiazol-5-yl)methyl]morpholine

ChemComp-WKY:
N-(3-methylpyridin-4-yl)acetamide

ChemComp-S6V:
1-[2-(2-oxidanylidenepyrrolidin-1-yl)ethyl]-3-phenyl-urea

ChemComp-X0M:
N-[(3S)-1,2,3,4-tetrahydroquinolin-3-yl]acetamide

ChemComp-X0S:
2-chloro-N-methylbenzene-1-sulfonamide

ChemComp-W0Y:
N-methyl-4-sulfamoylbenzamide

ChemComp-WGY:
N-(4-sulfamoylphenyl)propanamide

ChemComp-VVG:
N-(2-fluorophenyl)ethanesulfonamide

ChemComp-HR5:
~{N}-(cyclobutylmethyl)-1,5-dimethyl-pyrazole-4-carboxamide

ChemComp-GVV:
~{N}-(4-methyl-2-oxidanyl-phenyl)propanamide

ChemComp-VWA:
(1S)-1-(4-fluorophenyl)-N-methylethan-1-amine

ChemComp-O1M:
4-(4-fluorophenyl)piperazine-1-carboxamide

ChemComp-GOJ:
ethyl 1~{H}-pyrazole-4-carboxylate

ChemComp-HR8:
5-chloranyl-2-methoxy-~{N}-(2-methylpropyl)benzamide

ChemComp-STV:
~{N}-(1,3-benzodioxol-5-ylmethyl)ethanesulfonamide

ChemComp-S9S:
~{N}-[2-(4-fluorophenyl)ethyl]methanesulfonamide

ChemComp-W0A:
N-[(1H-benzimidazol-2-yl)methyl]butanamide

ChemComp-AWD:
~{N}-(4-fluorophenyl)-4-methyl-piperazine-1-carboxamide

ChemComp-X1G:
N-[(2H-1,3-benzodioxol-5-yl)methyl]-3-methylbutanamide

ChemComp-AYV:
1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea

ChemComp-WJ7:
2-bromo-4-fluoro-N,N-dimethylbenzamide

ChemComp-NV7:
1-[(furan-2-yl)methyl]-4-(methylsulfonyl)piperazine

ChemComp-TVP:
(2S)-1-ACETYL-2-METHYL-1,2,3,4-TETRAHYDROQUINOLINE

ChemComp-X1J:
1-(5-amino-2H-isoindol-2-yl)ethan-1-one

ChemComp-LVV:
4-[(4-methylphenyl)methyl]-1,4-thiazinane 1,1-dioxide

ChemComp-X1M:
1-(6-methoxypyridin-2-yl)-N-methylmethanamine

Source
  • rattus norvegicus (Norway rat)
  • gallus gallus (chicken)
  • bos taurus (cattle)
KeywordsCELL CYCLE / TUBULIN FOLD / CYTOSKELETON / MICROTUBULE

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