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Structure paper

TitleStructure and infection dynamics of mycobacteriophage Bxb1
Journal, issue, pagesTo Be Published
Publish dateAug 20, 2024 (structure data deposition date)
AuthorsFreeman KG / Mondal S / Macale LS / Podgorski J / White SJ / Silva B / Ortiz V / Huet A / Narsico JT / Ho MC ...Freeman KG / Mondal S / Macale LS / Podgorski J / White SJ / Silva B / Ortiz V / Huet A / Narsico JT / Ho MC / Jacobs-Sera D / Lowary TL / Conway JF / Park D / Hatfull GF
External linksSearch PubMed
MethodsEM (single particle) / EM (subtomogram averaging)
Resolution2.67 - 26.0 Å
Structure data

46661

9d93

EMDB-46661, PDB-9d93:
Mycobacteriophage Bxb1 tail tip - Composite map and model
Method: EM (single particle) / Resolution: 2.85 Å

EMDB-46663: Mycobacteriophage Bxb1 portal and connector assembly - C3 consensus refinement
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-46666: Mycobacteriophage Bxb1 portal and connector assembly - Portal and head-to-tail adaptor C12 local refinement
Method: EM (single particle) / Resolution: 2.69 Å

EMDB-46667: Mycobacteriophage Bxb1 portal and connector assembly - Head-to-tail stopper and tail terminator C6 local refinement
Method: EM (single particle) / Resolution: 2.68 Å

EMDB-46668: Mycobacteriophage Bxb1 portal and connector assembly - Tail tube C3 local refinement
Method: EM (single particle) / Resolution: 3.06 Å

46669

9d94

EMDB-46669, PDB-9d94:
Mycobacteriophage Bxb1 portal and connector assembly - Composite map and model
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-46673: Mycobacteriophage Bxb1 tail tube segment - C1 consensus refinement
Method: EM (single particle) / Resolution: 3.11 Å

EMDB-46674: Mycobacteriophage Bxb1 tail tube segment - Core C1 local refinement
Method: EM (single particle) / Resolution: 2.99 Å

EMDB-46675: Mycobacteriophage Bxb1 tail tube segment - CTE domain C1 local refinement
Method: EM (single particle) / Resolution: 4.88 Å

46676

9d9l

EMDB-46676, PDB-9d9l:
Mycobacteriophage Bxb1 tail tube segment - Composite map and model
Method: EM (single particle) / Resolution: 4.0 Å

EMDB-46678: Mycobacteriophage Bxb1 C1 Capsid and Portal - C1 consensus map
Method: EM (single particle) / Resolution: 3.44 Å

EMDB-46679: Mycobacteriophage Bxb1 C1 Capsid and Portal - Portal C1 local refinement
Method: EM (single particle) / Resolution: 3.31 Å

46681

9d9w

EMDB-46681, PDB-9d9w:
Mycobacteriophage Bxb1 C1 Capsid and Portal - Composite map and model
Method: EM (single particle) / Resolution: 3.5 Å

EMDB-46682: Mycobacteriophage Bxb1 Capsid - Icosahedral Consensus Map
Method: EM (single particle) / Resolution: 2.71 Å

EMDB-46684: Mycobacteriophage Bxb1 Capsid - Penton C1 local refinement
Method: EM (single particle) / Resolution: 3.17 Å

46685

9d9x

EMDB-46685, PDB-9d9x:
Mycobacteriophage Bxb1 Capsid - Composite map and model
Method: EM (single particle) / Resolution: 3.0 Å

EMDB-46687: Mycobacteriophage BaDAS-1 Icosahedral Map
Method: EM (single particle) / Resolution: 2.67 Å

EMDB-46702: Subtomogram averaging of Bxb1 phage capsid (DNA-filled) during the infection state
Method: EM (subtomogram averaging) / Resolution: 11.65 Å

EMDB-46703: Subtomogram averaging of Bxb1 phage tail tube (DNA-filled) during the infection state
Method: EM (subtomogram averaging) / Resolution: 7.0 Å

EMDB-46704: Subtomogram averaging of Bxb1 phage capsid (emptied) during the infection state
Method: EM (subtomogram averaging) / Resolution: 12.5 Å

EMDB-46705: Subtomogram averaging of Bxb1 phage tail tube (emptied) during the infection state
Method: EM (subtomogram averaging) / Resolution: 22.0 Å

EMDB-46706: Subtomogram averaging of Bxb1 phage portal (DNA-filled) during the infection state
Method: EM (subtomogram averaging) / Resolution: 23.0 Å

EMDB-46707: Subtomogram averaging of Bxb1 phage portal (emptied) during the infection state
Method: EM (subtomogram averaging) / Resolution: 26.0 Å

EMDB-46723: Subtomogram averaging of Bxb1 phage tail tip complex during the infection state
Method: EM (subtomogram averaging) / Resolution: 15.0 Å

Source
  • mycobacterium phage bxb1 (virus)
KeywordsVIRAL PROTEIN / Bacteriophage / tail tip / portal / tail tube / VIRUS / Mycobacteriophage Bxb1 / capsid

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