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Structure paper

TitleStructural Insights into Bortezomib-Induced Activation of the Caseinolytic Chaperone-Protease System in Mycobacterium tuberculosis
Journal, issue, pagesNat Commun, Vol. 16, Page 3466, Year 2025
Publish dateFeb 18, 2024 (structure data deposition date)
AuthorsZhou B / Gao Y / Zhao H / Liu B / Zhang H / Fang C / Yuan H / Wang J / Li Z / Zhao Y ...Zhou B / Gao Y / Zhao H / Liu B / Zhang H / Fang C / Yuan H / Wang J / Li Z / Zhao Y / Huang X / Wang X / Oliveira ASF / Spencer J / Mulholland AJ / Burston SG / Hu J / Su N / Chen X / He J / Zhang T / Xiong X
External linksNat Commun / Search PubMed
MethodsEM (single particle)
Resolution2.2 - 3.69 Å
Structure data

39157

8ycx

EMDB-39157, PDB-8ycx:
CryoEM structure of M. tuberculosis ClpC1P1P2 complex bound to bortezomib, conformation 2
Method: EM (single particle) / Resolution: 2.2 Å

39161

8yd0

EMDB-39161, PDB-8yd0:
CryoEM structure of M. tuberculosis ClpXP1P2 complex bound to bortezomib
Method: EM (single particle) / Resolution: 2.24 Å

39162

8yd1

EMDB-39162, PDB-8yd1:
CryoEM structure of M. tuberculosis ClpC1P1P2 complex bound to bortezomib, conformation 1
Method: EM (single particle) / Resolution: 2.81 Å

39163

8yd2

EMDB-39163, PDB-8yd2:
CryoEM structure of M. tuberculosis ClpP1P2 bound to bortezomib
Method: EM (single particle) / Resolution: 2.39 Å

39164

8yd4

EMDB-39164, PDB-8yd4:
CryoEM structure of apo M. tuberculosis ClpP1P2
Method: EM (single particle) / Resolution: 3.69 Å

Chemicals

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-BO2:
N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE / medication*YM

Source
  • Mycobacterium tuberculosis (bacteria)
  • mycobacterium tuberculosis h37rv (bacteria)
  • bos grunniens (domestic yak)
KeywordsHYDROLASE / Mycobacterium tuberculosis / Caseinolytic protease system / Activation / holoenzymes / antibiotics / Bortezomib

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